(11 nodes) Nuclear pore central transport channel network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000018412	Nuclear pore complex protein Nup53. (254 aa)
	LOC107561287	NTF2-related export protein 2-like. (143 aa)
	LOC107574190	Nuclear pore complex protein Nup62. (501 aa)
	ENSSGRP00000028644	Nuclear pore complex protein Nup54-like. (233 aa)
	ENSSGRP00000033777	Nuclear transport factor 2. (83 aa)
	ENSSGRP00000064523	Nucleoporin 35. (211 aa)
	ENSSGRP00000064526	annotation not available (93 aa)
	ENSSGRP00000071664	Nucleoporin 35. (209 aa)
	ENSSGRP00000097854	Nuclear transport factor 2. (92 aa)
	LOC107600148	NTF2-related export protein 2-like. (143 aa)
	LOC107568993	Nuclear pore complex protein Nup62. (504 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000018412	ENSSGRP00000028644	ENSSGRP00000018412	ENSSGRP00000028644	Nuclear pore complex protein Nup53.	Nuclear pore complex protein Nup54-like.	0.968
ENSSGRP00000018412	LOC107561287	ENSSGRP00000018412	ENSSGRP00000019030	Nuclear pore complex protein Nup53.	NTF2-related export protein 2-like.	0.662
ENSSGRP00000018412	LOC107568993	ENSSGRP00000018412	ENSSGRP00000014313	Nuclear pore complex protein Nup53.	Nuclear pore complex protein Nup62.	0.896
ENSSGRP00000018412	LOC107574190	ENSSGRP00000018412	ENSSGRP00000019676	Nuclear pore complex protein Nup53.	Nuclear pore complex protein Nup62.	0.896
ENSSGRP00000018412	LOC107600148	ENSSGRP00000018412	ENSSGRP00000097877	Nuclear pore complex protein Nup53.	NTF2-related export protein 2-like.	0.662
ENSSGRP00000028644	ENSSGRP00000018412	ENSSGRP00000028644	ENSSGRP00000018412	Nuclear pore complex protein Nup54-like.	Nuclear pore complex protein Nup53.	0.968
ENSSGRP00000028644	ENSSGRP00000033777	ENSSGRP00000028644	ENSSGRP00000033777	Nuclear pore complex protein Nup54-like.	Nuclear transport factor 2.	0.682
ENSSGRP00000028644	ENSSGRP00000064523	ENSSGRP00000028644	ENSSGRP00000064523	Nuclear pore complex protein Nup54-like.	Nucleoporin 35.	0.968
ENSSGRP00000028644	ENSSGRP00000064526	ENSSGRP00000028644	ENSSGRP00000064526	Nuclear pore complex protein Nup54-like.	annotation not available	0.968
ENSSGRP00000028644	ENSSGRP00000071664	ENSSGRP00000028644	ENSSGRP00000071664	Nuclear pore complex protein Nup54-like.	Nucleoporin 35.	0.968
ENSSGRP00000028644	ENSSGRP00000097854	ENSSGRP00000028644	ENSSGRP00000097854	Nuclear pore complex protein Nup54-like.	Nuclear transport factor 2.	0.682
ENSSGRP00000028644	LOC107561287	ENSSGRP00000028644	ENSSGRP00000019030	Nuclear pore complex protein Nup54-like.	NTF2-related export protein 2-like.	0.864
ENSSGRP00000028644	LOC107568993	ENSSGRP00000028644	ENSSGRP00000014313	Nuclear pore complex protein Nup54-like.	Nuclear pore complex protein Nup62.	0.999
ENSSGRP00000028644	LOC107574190	ENSSGRP00000028644	ENSSGRP00000019676	Nuclear pore complex protein Nup54-like.	Nuclear pore complex protein Nup62.	0.999
ENSSGRP00000028644	LOC107600148	ENSSGRP00000028644	ENSSGRP00000097877	Nuclear pore complex protein Nup54-like.	NTF2-related export protein 2-like.	0.864
ENSSGRP00000033777	ENSSGRP00000028644	ENSSGRP00000033777	ENSSGRP00000028644	Nuclear transport factor 2.	Nuclear pore complex protein Nup54-like.	0.682
ENSSGRP00000033777	LOC107561287	ENSSGRP00000033777	ENSSGRP00000019030	Nuclear transport factor 2.	NTF2-related export protein 2-like.	0.541
ENSSGRP00000033777	LOC107568993	ENSSGRP00000033777	ENSSGRP00000014313	Nuclear transport factor 2.	Nuclear pore complex protein Nup62.	0.759
ENSSGRP00000033777	LOC107574190	ENSSGRP00000033777	ENSSGRP00000019676	Nuclear transport factor 2.	Nuclear pore complex protein Nup62.	0.759
ENSSGRP00000033777	LOC107600148	ENSSGRP00000033777	ENSSGRP00000097877	Nuclear transport factor 2.	NTF2-related export protein 2-like.	0.541