(44 nodes) Protein insertion into ER membrane network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107584459	ER membrane protein complex subunit 3. (261 aa)
	emc4	ER membrane protein complex subunit 4. (186 aa)
	ENSSGRP00000003245	Golgi to ER traffic protein 4 homolog. (326 aa)
	WDR83OS	WD repeat domain 83 opposite strand. (100 aa)
	LOC107598133	ER membrane protein complex subunit 7-like. (255 aa)
	ENSSGRP00000015438	Translocating chain-associated membrane protein 2-like. (351 aa)
	LOC107569530	Arsenite/tail-anchored protein-transporting ATPase. (359 aa)
	ENSSGRP00000015984	Translocating chain-associated membrane protein 1-like 1. (418 aa)
	LOC107586923	Large proline-rich protein BAG6-like isoform X1. (1197 aa)
	LOC107551156	ER membrane protein complex subunit 10 isoform X1. (260 aa)
	LOC107591116	ER membrane protein complex subunit 1-like isoform X1. (964 aa)
	ENSSGRP00000025631	Coiled-coil domain-containing protein 47-like. (328 aa)
	ENSSGRP00000027051	ER membrane protein complex subunit 2-like. (296 aa)
	LOC107583208	Arsenite/tail-anchored protein-transporting ATPase. (341 aa)
	ENSSGRP00000033530	Large proline-rich protein BAG6-like. (1023 aa)
	LOC107582235	Large proline-rich protein BAG6-like. (1193 aa)
	LOC107556496	Protein Asterix isoform X1. (106 aa)
	ENSSGRP00000047583	Tail-anchored protein insertion receptor WRB-like. (165 aa)
	LOC107600623	ER membrane protein complex subunit 2 isoform X1. (297 aa)
	ENSSGRP00000051394	annotation not available (57 aa)
	ENSSGRP00000051411	Translocating chain-associated membrane protein 1-like. (367 aa)
	LOC107549094	ER membrane protein complex subunit 7. (238 aa)
	LOC107601125	Membrane magnesium transporter 1-like. (130 aa)
	LOC107562643	Ubiquitin-like protein 4A. (156 aa)
	LOC107571613	Calcium signal-modulating cyclophilin ligand-like. (269 aa)
	LOC107560676	Membrane magnesium transporter 1. (130 aa)
	LOC107556771	ER membrane protein complex subunit 9-like isoform X1. (232 aa)
	ENSSGRP00000070601	ER membrane protein complex subunit 3-like. (184 aa)
	emc8	ER membrane protein complex subunit 8/9. (204 aa)
	LOC107603245	Calcium signal-modulating cyclophilin ligand-like isoform X1. (233 aa)
	ENSSGRP00000082062	Large proline-rich protein BAG6 isoform X1. (1111 aa)
	LOC107601757	ER membrane protein complex subunit 3-like. (261 aa)
	ENSSGRP00000082785	annotation not available (96 aa)
	LOC107553592	ER membrane protein complex subunit 6-like. (110 aa)
	LOC107553161	Ubiquitin-like protein 4A. (159 aa)
	Wrb	Tail-anchored protein insertion receptor WRB. (67 aa)
	LOC107555798	Translocating chain-associated membrane protein 1-like. (386 aa)
	LOC107598031	Golgi to ER traffic protein 4 homolog. (330 aa)
	LOC107601948	ER membrane protein complex subunit 7-like. (237 aa)
	LOC107551848	ER membrane protein complex subunit 9-like. (205 aa)
	LOC107563984	ER membrane protein complex subunit 10-like isoform X1. (257 aa)
	LOC107552561	ER membrane protein complex subunit 6. (110 aa)
	tram1	Translocating chain-associated membrane protein 1 isoform X1. (369 aa)
	ccdc47	Coiled-coil domain-containing protein 47. (508 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003245	ENSSGRP00000025631	ENSSGRP00000003245	ENSSGRP00000025631	Golgi to ER traffic protein 4 homolog.	Coiled-coil domain-containing protein 47-like.	0.462
ENSSGRP00000003245	ENSSGRP00000033530	ENSSGRP00000003245	ENSSGRP00000033530	Golgi to ER traffic protein 4 homolog.	Large proline-rich protein BAG6-like.	0.954
ENSSGRP00000003245	ENSSGRP00000047583	ENSSGRP00000003245	ENSSGRP00000047583	Golgi to ER traffic protein 4 homolog.	Tail-anchored protein insertion receptor WRB-like.	0.745
ENSSGRP00000003245	ENSSGRP00000082062	ENSSGRP00000003245	ENSSGRP00000082062	Golgi to ER traffic protein 4 homolog.	Large proline-rich protein BAG6 isoform X1.	0.954
ENSSGRP00000003245	LOC107553161	ENSSGRP00000003245	ENSSGRP00000090842	Golgi to ER traffic protein 4 homolog.	Ubiquitin-like protein 4A.	0.923
ENSSGRP00000003245	LOC107562643	ENSSGRP00000003245	ENSSGRP00000061332	Golgi to ER traffic protein 4 homolog.	Ubiquitin-like protein 4A.	0.923
ENSSGRP00000003245	LOC107569530	ENSSGRP00000003245	ENSSGRP00000015554	Golgi to ER traffic protein 4 homolog.	Arsenite/tail-anchored protein-transporting ATPase.	0.988
ENSSGRP00000003245	LOC107571613	ENSSGRP00000003245	ENSSGRP00000066631	Golgi to ER traffic protein 4 homolog.	Calcium signal-modulating cyclophilin ligand-like.	0.592
ENSSGRP00000003245	LOC107582235	ENSSGRP00000003245	ENSSGRP00000035184	Golgi to ER traffic protein 4 homolog.	Large proline-rich protein BAG6-like.	0.954
ENSSGRP00000003245	LOC107583208	ENSSGRP00000003245	ENSSGRP00000027479	Golgi to ER traffic protein 4 homolog.	Arsenite/tail-anchored protein-transporting ATPase.	0.988
ENSSGRP00000003245	LOC107586923	ENSSGRP00000003245	ENSSGRP00000018854	Golgi to ER traffic protein 4 homolog.	Large proline-rich protein BAG6-like isoform X1.	0.954
ENSSGRP00000003245	LOC107603245	ENSSGRP00000003245	ENSSGRP00000081266	Golgi to ER traffic protein 4 homolog.	Calcium signal-modulating cyclophilin ligand-like isoform X1.	0.592
ENSSGRP00000003245	Wrb	ENSSGRP00000003245	ENSSGRP00000093039	Golgi to ER traffic protein 4 homolog.	Tail-anchored protein insertion receptor WRB.	0.724
ENSSGRP00000003245	ccdc47	ENSSGRP00000003245	ENSSGRP00000112041	Golgi to ER traffic protein 4 homolog.	Coiled-coil domain-containing protein 47.	0.462
ENSSGRP00000015984	ENSSGRP00000025631	ENSSGRP00000015984	ENSSGRP00000025631	Translocating chain-associated membrane protein 1-like 1.	Coiled-coil domain-containing protein 47-like.	0.506
ENSSGRP00000015984	LOC107552561	ENSSGRP00000015984	ENSSGRP00000106614	Translocating chain-associated membrane protein 1-like 1.	ER membrane protein complex subunit 6.	0.454
ENSSGRP00000015984	LOC107553592	ENSSGRP00000015984	ENSSGRP00000089213	Translocating chain-associated membrane protein 1-like 1.	ER membrane protein complex subunit 6-like.	0.454
ENSSGRP00000015984	ccdc47	ENSSGRP00000015984	ENSSGRP00000112041	Translocating chain-associated membrane protein 1-like 1.	Coiled-coil domain-containing protein 47.	0.506
ENSSGRP00000025631	ENSSGRP00000003245	ENSSGRP00000025631	ENSSGRP00000003245	Coiled-coil domain-containing protein 47-like.	Golgi to ER traffic protein 4 homolog.	0.462
ENSSGRP00000025631	ENSSGRP00000015984	ENSSGRP00000025631	ENSSGRP00000015984	Coiled-coil domain-containing protein 47-like.	Translocating chain-associated membrane protein 1-like 1.	0.506