(27 nodes) Cell-cell junction maintenance network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000074940	Uncharacterized protein C1orf106 homolog. (323 aa)
	ENSSGRP00000101571	Whirlin a. (477 aa)
	F2R	Coagulation factor II (thrombin) receptor. (402 aa)
	F2R-2	Coagulation factor II (thrombin) receptor. (405 aa)
	F2R-3	Coagulation factor II thrombin receptor. (393 aa)
	ENSSGRP00000101567	Whirlin-like. (168 aa)
	LOC107583469	Tyrosine-protein kinase fyna. (537 aa)
	ENSSGRP00000069253	Tyrosine-protein kinase Yes. (574 aa)
	LOC107564973	Tyrosine-protein kinase fyna-like. (490 aa)
	ENSSGRP00000073379	Pleckstrin homology domain containing, family A member 7a. (715 aa)
	LOC107596921	Partitioning defective 6 homolog alpha-like. (387 aa)
	ENSSGRP00000007771	Atypical protein kinase C iota type. (559 aa)
	ENSSGRP00000012839	Innate immunity activator a. (537 aa)
	ENSSGRP00000013511	Whirlin-like. (111 aa)
	LOC107560234	Whirlin-like isoform X1. (962 aa)
	LOC107583728	Partitioning defective 6 homolog alpha-like. (390 aa)
	ENSSGRP00000037495	Pleckstrin homology domain containing, family A member 7b. (1010 aa)
	whrn	Whirlin isoform X1. (943 aa)
	LOC107558136	Tyrosine-protein kinase yes-like. (547 aa)
	ENSSGRP00000043983	Pleckstrin homology domain-containing family A member 7-like. (101 aa)
	ENSSGRP00000059867	Pleckstrin homology domain containing, family A member 7b. (1093 aa)
	LOC107585381	Proteinase-activated receptor 1-like isoform X1. (465 aa)
	ENSSGRP00000060602	Coagulation factor II (thrombin) receptor. (361 aa)
	ENSSGRP00000060604	annotation not available (395 aa)
	ENSSGRP00000060605	Coagulation factor II (thrombin) receptor. (402 aa)
	ENSSGRP00000060606	annotation not available (352 aa)
	ENSSGRP00000065951	Atypical protein kinase C iota type. (566 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007771	ENSSGRP00000013511	ENSSGRP00000007771	ENSSGRP00000013511	Atypical protein kinase C iota type.	Whirlin-like.	0.529
ENSSGRP00000007771	ENSSGRP00000065951	ENSSGRP00000007771	ENSSGRP00000065951	Atypical protein kinase C iota type.	Atypical protein kinase C iota type.	0.900
ENSSGRP00000007771	ENSSGRP00000101567	ENSSGRP00000007771	ENSSGRP00000101567	Atypical protein kinase C iota type.	Whirlin-like.	0.529
ENSSGRP00000007771	ENSSGRP00000101571	ENSSGRP00000007771	ENSSGRP00000101571	Atypical protein kinase C iota type.	Whirlin a.	0.529
ENSSGRP00000007771	LOC107560234	ENSSGRP00000007771	ENSSGRP00000020464	Atypical protein kinase C iota type.	Whirlin-like isoform X1.	0.529
ENSSGRP00000007771	LOC107583728	ENSSGRP00000007771	ENSSGRP00000033394	Atypical protein kinase C iota type.	Partitioning defective 6 homolog alpha-like.	0.994
ENSSGRP00000007771	LOC107596921	ENSSGRP00000007771	ENSSGRP00000097244	Atypical protein kinase C iota type.	Partitioning defective 6 homolog alpha-like.	0.994
ENSSGRP00000007771	whrn	ENSSGRP00000007771	ENSSGRP00000040571	Atypical protein kinase C iota type.	Whirlin isoform X1.	0.529
ENSSGRP00000013511	ENSSGRP00000007771	ENSSGRP00000013511	ENSSGRP00000007771	Whirlin-like.	Atypical protein kinase C iota type.	0.529
ENSSGRP00000013511	ENSSGRP00000065951	ENSSGRP00000013511	ENSSGRP00000065951	Whirlin-like.	Atypical protein kinase C iota type.	0.529
ENSSGRP00000013511	LOC107583728	ENSSGRP00000013511	ENSSGRP00000033394	Whirlin-like.	Partitioning defective 6 homolog alpha-like.	0.433
ENSSGRP00000013511	LOC107596921	ENSSGRP00000013511	ENSSGRP00000097244	Whirlin-like.	Partitioning defective 6 homolog alpha-like.	0.433
ENSSGRP00000065951	ENSSGRP00000007771	ENSSGRP00000065951	ENSSGRP00000007771	Atypical protein kinase C iota type.	Atypical protein kinase C iota type.	0.900
ENSSGRP00000065951	ENSSGRP00000013511	ENSSGRP00000065951	ENSSGRP00000013511	Atypical protein kinase C iota type.	Whirlin-like.	0.529
ENSSGRP00000065951	ENSSGRP00000101567	ENSSGRP00000065951	ENSSGRP00000101567	Atypical protein kinase C iota type.	Whirlin-like.	0.529
ENSSGRP00000065951	ENSSGRP00000101571	ENSSGRP00000065951	ENSSGRP00000101571	Atypical protein kinase C iota type.	Whirlin a.	0.529
ENSSGRP00000065951	LOC107560234	ENSSGRP00000065951	ENSSGRP00000020464	Atypical protein kinase C iota type.	Whirlin-like isoform X1.	0.529
ENSSGRP00000065951	LOC107583728	ENSSGRP00000065951	ENSSGRP00000033394	Atypical protein kinase C iota type.	Partitioning defective 6 homolog alpha-like.	0.994
ENSSGRP00000065951	LOC107596921	ENSSGRP00000065951	ENSSGRP00000097244	Atypical protein kinase C iota type.	Partitioning defective 6 homolog alpha-like.	0.994
ENSSGRP00000065951	whrn	ENSSGRP00000065951	ENSSGRP00000040571	Atypical protein kinase C iota type.	Whirlin isoform X1.	0.529