(23 nodes) Positive regulation of cilium assembly network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tapt1	Transmembrane anterior posterior transformation protein 1 homolog isoform X1. (579 aa)
	LOC107567294	ATM interactor-like. (760 aa)
	cep120	Centrosomal protein 120. (812 aa)
	ENSSGRP00000100860	Intraflagellar transport protein 88 homolog. (643 aa)
	ENSSGRP00000076187	Bardet-Biedl syndrome 4 protein-like. (184 aa)
	Bbs4	Bardet-Biedl syndrome 4 protein. (186 aa)
	ENSSGRP00000074314	Huntingtin-like isoform X1. (3119 aa)
	ENSSGRP00000072410	Intraflagellar transport protein 88 homolog. (440 aa)
	ENSSGRP00000065437	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like. (140 aa)
	ENSSGRP00000062411	ATM interactor. (582 aa)
	LOC107595759	WD repeat-containing protein WRAP73-like. (465 aa)
	zmynd10	Zinc finger MYND domain-containing protein 10. (448 aa)
	ENSSGRP00000056346	Transmembrane anterior posterior transformation 1b. (472 aa)
	LOC107566553	Protein phosphatase 1 regulatory subunit 35-like. (233 aa)
	ENSSGRP00000046665	Bardet-Biedl syndrome 4. (402 aa)
	ENSSGRP00000040517	Serologically defined colon cancer antigen 3 homolog. (97 aa)
	ENSSGRP00000038203	Transmembrane anterior posterior transformation 1b. (543 aa)
	ENSSGRP00000038162	Zinc finger, MYND-type containing 10. (408 aa)
	ENSSGRP00000018679	annotation not available (411 aa)
	ENSSGRP00000014530	Huntingtin-like. (3116 aa)
	LOC107587560	Serologically defined colon cancer antigen 3 homolog. (338 aa)
	ENSSGRP00000034654	Transmembrane anterior posterior transformation 1a. (393 aa)
	LOC107602469	WD repeat-containing protein WRAP73-like isoform X1. (448 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bbs4	ENSSGRP00000018679	ENSSGRP00000076186	ENSSGRP00000018679	Bardet-Biedl syndrome 4 protein.	annotation not available	0.545
Bbs4	ENSSGRP00000072410	ENSSGRP00000076186	ENSSGRP00000072410	Bardet-Biedl syndrome 4 protein.	Intraflagellar transport protein 88 homolog.	0.479
Bbs4	ENSSGRP00000100860	ENSSGRP00000076186	ENSSGRP00000100860	Bardet-Biedl syndrome 4 protein.	Intraflagellar transport protein 88 homolog.	0.479
ENSSGRP00000018679	Bbs4	ENSSGRP00000018679	ENSSGRP00000076186	annotation not available	Bardet-Biedl syndrome 4 protein.	0.545
ENSSGRP00000018679	ENSSGRP00000046665	ENSSGRP00000018679	ENSSGRP00000046665	annotation not available	Bardet-Biedl syndrome 4.	0.545
ENSSGRP00000018679	ENSSGRP00000065437	ENSSGRP00000018679	ENSSGRP00000065437	annotation not available	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	0.601
ENSSGRP00000018679	ENSSGRP00000072410	ENSSGRP00000018679	ENSSGRP00000072410	annotation not available	Intraflagellar transport protein 88 homolog.	0.454
ENSSGRP00000018679	ENSSGRP00000076187	ENSSGRP00000018679	ENSSGRP00000076187	annotation not available	Bardet-Biedl syndrome 4 protein-like.	0.545
ENSSGRP00000018679	ENSSGRP00000100860	ENSSGRP00000018679	ENSSGRP00000100860	annotation not available	Intraflagellar transport protein 88 homolog.	0.454
ENSSGRP00000040517	ENSSGRP00000065437	ENSSGRP00000040517	ENSSGRP00000065437	Serologically defined colon cancer antigen 3 homolog.	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	0.638
ENSSGRP00000046665	ENSSGRP00000018679	ENSSGRP00000046665	ENSSGRP00000018679	Bardet-Biedl syndrome 4.	annotation not available	0.545
ENSSGRP00000046665	ENSSGRP00000072410	ENSSGRP00000046665	ENSSGRP00000072410	Bardet-Biedl syndrome 4.	Intraflagellar transport protein 88 homolog.	0.479
ENSSGRP00000046665	ENSSGRP00000100860	ENSSGRP00000046665	ENSSGRP00000100860	Bardet-Biedl syndrome 4.	Intraflagellar transport protein 88 homolog.	0.479
ENSSGRP00000065437	ENSSGRP00000018679	ENSSGRP00000065437	ENSSGRP00000018679	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	annotation not available	0.601
ENSSGRP00000065437	ENSSGRP00000040517	ENSSGRP00000065437	ENSSGRP00000040517	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	Serologically defined colon cancer antigen 3 homolog.	0.638
ENSSGRP00000065437	ENSSGRP00000072410	ENSSGRP00000065437	ENSSGRP00000072410	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	Intraflagellar transport protein 88 homolog.	0.467
ENSSGRP00000065437	ENSSGRP00000100860	ENSSGRP00000065437	ENSSGRP00000100860	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	Intraflagellar transport protein 88 homolog.	0.467
ENSSGRP00000065437	LOC107587560	ENSSGRP00000065437	ENSSGRP00000036847	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	Serologically defined colon cancer antigen 3 homolog.	0.638
ENSSGRP00000065437	cep120	ENSSGRP00000065437	ENSSGRP00000003000	LOW QUALITY PROTEIN: centriolar coiled-coil protein of 110 kDa-like.	Centrosomal protein 120.	0.633
ENSSGRP00000072410	Bbs4	ENSSGRP00000072410	ENSSGRP00000076186	Intraflagellar transport protein 88 homolog.	Bardet-Biedl syndrome 4 protein.	0.479