(25 nodes) Positive regulation of transcription by RNA polymerase III network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107595847	Splicing factor 3B subunit 1-like isoform X1. (1311 aa)
	LOC107594963	Serine/threonine-protein kinase mTOR-like. (2549 aa)
	LOC107592846	Protein DEK-like isoform X1. (468 aa)
	LOC107566277	Little elongation complex subunit 1-like isoform X1. (1476 aa)
	ENSSGRP00000029932	annotation not available (1038 aa)
	ENSSGRP00000034146	Transcription factor IIIB 90 kDa subunit-like. (642 aa)
	ENSSGRP00000034153	Transcription factor IIIB 90 kDa subunit-like. (90 aa)
	LOC107553319	Regulatory-associated protein of mTOR-like isoform X1. (1362 aa)
	LOC107600508	Protein DEK-like. (449 aa)
	ENSSGRP00000042471	Little elongation complex subunit 2-like. (888 aa)
	LOC107564227	Serine/threonine-protein kinase mTOR. (2552 aa)
	ENSSGRP00000056588	Transcription factor IIIB 90 kDa subunit-like. (626 aa)
	ENSSGRP00000060942	Bromodomain adjacent to zinc finger domain, 1A. (929 aa)
	ENSSGRP00000062030	BRF1 RNA polymerase III transcription initiation factor subunit b. (661 aa)
	ENSSGRP00000063161	DEAD (Asp-Glu-Ala-Asp) box helicase 21. (699 aa)
	LOC107550215	Little elongation complex subunit 2-like. (788 aa)
	LOC107588615	DNA excision repair protein ERCC-6-like. (1395 aa)
	ENSSGRP00000072172	Transcription factor IIIB 90 kDa subunit-like. (508 aa)
	ENSSGRP00000074243	Androgen receptor-like. (862 aa)
	rptor	Regulatory-associated protein of mTOR isoform X1. (1363 aa)
	ENSSGRP00000084758	DEAD (Asp-Glu-Ala-Asp) box helicase 21. (653 aa)
	LOC107596701	Androgen receptor-like. (852 aa)
	ENSSGRP00000089850	annotation not available (238 aa)
	ENSSGRP00000089852	annotation not available (119 aa)
	LOC107569635	Splicing factor 3B subunit 1 isoform X1. (1309 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000029932	ENSSGRP00000042471	ENSSGRP00000029932	ENSSGRP00000042471	annotation not available	Little elongation complex subunit 2-like.	0.636
ENSSGRP00000029932	LOC107550215	ENSSGRP00000029932	ENSSGRP00000066265	annotation not available	Little elongation complex subunit 2-like.	0.636
ENSSGRP00000042471	ENSSGRP00000029932	ENSSGRP00000042471	ENSSGRP00000029932	Little elongation complex subunit 2-like.	annotation not available	0.636
ENSSGRP00000042471	LOC107566277	ENSSGRP00000042471	ENSSGRP00000028337	Little elongation complex subunit 2-like.	Little elongation complex subunit 1-like isoform X1.	0.636
ENSSGRP00000060942	ENSSGRP00000063161	ENSSGRP00000060942	ENSSGRP00000063161	Bromodomain adjacent to zinc finger domain, 1A.	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	0.625
ENSSGRP00000060942	ENSSGRP00000084758	ENSSGRP00000060942	ENSSGRP00000084758	Bromodomain adjacent to zinc finger domain, 1A.	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	0.625
ENSSGRP00000060942	ENSSGRP00000089850	ENSSGRP00000060942	ENSSGRP00000089850	Bromodomain adjacent to zinc finger domain, 1A.	annotation not available	0.746
ENSSGRP00000060942	ENSSGRP00000089852	ENSSGRP00000060942	ENSSGRP00000089852	Bromodomain adjacent to zinc finger domain, 1A.	annotation not available	0.746
ENSSGRP00000060942	LOC107569635	ENSSGRP00000060942	ENSSGRP00000105204	Bromodomain adjacent to zinc finger domain, 1A.	Splicing factor 3B subunit 1 isoform X1.	0.745
ENSSGRP00000060942	LOC107588615	ENSSGRP00000060942	ENSSGRP00000071696	Bromodomain adjacent to zinc finger domain, 1A.	DNA excision repair protein ERCC-6-like.	0.746
ENSSGRP00000060942	LOC107592846	ENSSGRP00000060942	ENSSGRP00000010048	Bromodomain adjacent to zinc finger domain, 1A.	Protein DEK-like isoform X1.	0.760
ENSSGRP00000060942	LOC107595847	ENSSGRP00000060942	ENSSGRP00000105982	Bromodomain adjacent to zinc finger domain, 1A.	Splicing factor 3B subunit 1-like isoform X1.	0.745
ENSSGRP00000060942	LOC107600508	ENSSGRP00000060942	ENSSGRP00000039080	Bromodomain adjacent to zinc finger domain, 1A.	Protein DEK-like.	0.760
ENSSGRP00000063161	ENSSGRP00000060942	ENSSGRP00000063161	ENSSGRP00000060942	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Bromodomain adjacent to zinc finger domain, 1A.	0.625
ENSSGRP00000063161	ENSSGRP00000089850	ENSSGRP00000063161	ENSSGRP00000089850	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	annotation not available	0.738
ENSSGRP00000063161	ENSSGRP00000089852	ENSSGRP00000063161	ENSSGRP00000089852	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	annotation not available	0.738
ENSSGRP00000063161	LOC107569635	ENSSGRP00000063161	ENSSGRP00000105204	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Splicing factor 3B subunit 1 isoform X1.	0.874
ENSSGRP00000063161	LOC107588615	ENSSGRP00000063161	ENSSGRP00000071696	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	DNA excision repair protein ERCC-6-like.	0.738
ENSSGRP00000063161	LOC107592846	ENSSGRP00000063161	ENSSGRP00000010048	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Protein DEK-like isoform X1.	0.794
ENSSGRP00000063161	LOC107595847	ENSSGRP00000063161	ENSSGRP00000105982	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Splicing factor 3B subunit 1-like isoform X1.	0.874