(16 nodes) GDP-L-fucose metabolic process network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000050652	annotation not available (336 aa)
	LOC107559996	L-fucose kinase-like isoform X1. (1067 aa)
	ENSSGRP00000072688	L-fucose kinase-like. (586 aa)
	ENSSGRP00000083726	annotation not available (64 aa)
	ENSSGRP00000084701	GDP-mannose 4,6 dehydratase-like. (318 aa)
	LOC107559102	GDP-L-fucose synthase-like isoform X1. (219 aa)
	ENSSGRP00000085850	annotation not available (377 aa)
	gmds	GDP-mannose 4,6 dehydratase. (371 aa)
	ENSSGRP00000058368	Fucosyltransferase 8b (alpha (1,6) fucosyltransferase). (542 aa)
	LOC107592788	Glycoprotein 6-alpha-L-fucosyltransferase. (581 aa)
	LOC107553275	Glycoprotein 6-alpha-L-fucosyltransferase. (441 aa)
	ENSSGRP00000011186	annotation not available (325 aa)
	ENSSGRP00000003471	GDP-mannose 4,6 dehydratase-like. (99 aa)
	tsta3	GDP-L-fucose synthase isoform X1. (326 aa)
	LOC107559123	Glycoprotein 6-alpha-L-fucosyltransferase. (580 aa)
	TSTA3	Tissue specific transplantation antigen P35B. (318 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003471	ENSSGRP00000011186	ENSSGRP00000003471	ENSSGRP00000011186	GDP-mannose 4,6 dehydratase-like.	annotation not available	0.554
ENSSGRP00000003471	ENSSGRP00000050652	ENSSGRP00000003471	ENSSGRP00000050652	GDP-mannose 4,6 dehydratase-like.	annotation not available	0.919
ENSSGRP00000003471	ENSSGRP00000058368	ENSSGRP00000003471	ENSSGRP00000058368	GDP-mannose 4,6 dehydratase-like.	Fucosyltransferase 8b (alpha (1,6) fucosyltransferase).	0.418
ENSSGRP00000003471	ENSSGRP00000072688	ENSSGRP00000003471	ENSSGRP00000072688	GDP-mannose 4,6 dehydratase-like.	L-fucose kinase-like.	0.554
ENSSGRP00000003471	ENSSGRP00000083726	ENSSGRP00000003471	ENSSGRP00000083726	GDP-mannose 4,6 dehydratase-like.	annotation not available	0.418
ENSSGRP00000003471	ENSSGRP00000085850	ENSSGRP00000003471	ENSSGRP00000085850	GDP-mannose 4,6 dehydratase-like.	annotation not available	0.917
ENSSGRP00000003471	LOC107553275	ENSSGRP00000003471	ENSSGRP00000029120	GDP-mannose 4,6 dehydratase-like.	Glycoprotein 6-alpha-L-fucosyltransferase.	0.418
ENSSGRP00000003471	LOC107559102	ENSSGRP00000003471	ENSSGRP00000085385	GDP-mannose 4,6 dehydratase-like.	GDP-L-fucose synthase-like isoform X1.	0.922
ENSSGRP00000003471	LOC107559123	ENSSGRP00000003471	ENSSGRP00000098541	GDP-mannose 4,6 dehydratase-like.	Glycoprotein 6-alpha-L-fucosyltransferase.	0.418
ENSSGRP00000003471	LOC107559996	ENSSGRP00000003471	ENSSGRP00000061392	GDP-mannose 4,6 dehydratase-like.	L-fucose kinase-like isoform X1.	0.554
ENSSGRP00000003471	LOC107592788	ENSSGRP00000003471	ENSSGRP00000040875	GDP-mannose 4,6 dehydratase-like.	Glycoprotein 6-alpha-L-fucosyltransferase.	0.418
ENSSGRP00000003471	TSTA3	ENSSGRP00000003471	ENSSGRP00000050664	GDP-mannose 4,6 dehydratase-like.	Tissue specific transplantation antigen P35B.	0.918
ENSSGRP00000003471	tsta3	ENSSGRP00000003471	ENSSGRP00000050651	GDP-mannose 4,6 dehydratase-like.	GDP-L-fucose synthase isoform X1.	0.916
ENSSGRP00000011186	ENSSGRP00000003471	ENSSGRP00000011186	ENSSGRP00000003471	annotation not available	GDP-mannose 4,6 dehydratase-like.	0.554
ENSSGRP00000011186	ENSSGRP00000050652	ENSSGRP00000011186	ENSSGRP00000050652	annotation not available	annotation not available	0.578
ENSSGRP00000011186	ENSSGRP00000084701	ENSSGRP00000011186	ENSSGRP00000084701	annotation not available	GDP-mannose 4,6 dehydratase-like.	0.554
ENSSGRP00000011186	ENSSGRP00000085850	ENSSGRP00000011186	ENSSGRP00000085850	annotation not available	annotation not available	0.578
ENSSGRP00000011186	LOC107559102	ENSSGRP00000011186	ENSSGRP00000085385	annotation not available	GDP-L-fucose synthase-like isoform X1.	0.578
ENSSGRP00000011186	TSTA3	ENSSGRP00000011186	ENSSGRP00000050664	annotation not available	Tissue specific transplantation antigen P35B.	0.578
ENSSGRP00000011186	gmds	ENSSGRP00000011186	ENSSGRP00000093331	annotation not available	GDP-mannose 4,6 dehydratase.	0.554