(117 nodes) Vesicle docking network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107595065	Ras-related protein Rab-13-like isoform X1. (199 aa)
	LOC107565974	Syntaxin-binding protein 3-like isoform X1. (582 aa)
	ENSSGRP00000111263	Syntaxin-10-like. (258 aa)
	LOC107555374	Syntaxin-8-like. (240 aa)
	LOC107593269	Ras-related protein Rab-10. (201 aa)
	ENSSGRP00000108981	Syntaxin-6-like. (262 aa)
	LOC107592692	Ras-related protein Rab-3B-like. (217 aa)
	stx7	Syntaxin 7. (261 aa)
	ENSSGRP00000108088	Unc-13 homolog Ba (C. elegans). (1096 aa)
	ENSSGRP00000108082	annotation not available (216 aa)
	LOC107548153	Syntaxin-5-like. (347 aa)
	ENSSGRP00000105332	annotation not available (93 aa)
	ENSSGRP00000105331	Syntaxin-1B-like. (180 aa)
	LOC107584077	Syntaxin-4-like. (297 aa)
	RAB3C-2	Ras-related protein Rab-3C. (224 aa)
	ENSSGRP00000101712	Syntaxin binding protein 1a. (568 aa)
	ENSSGRP00000101658	Syntaxin-17-like. (292 aa)
	ENSSGRP00000099896	Si:ch211-240l19.7. (134 aa)
	LOC107602125	Vacuolar protein sorting-associated protein 18 homolog. (974 aa)
	Rab15	Ras-related protein Rab-15. (209 aa)
	LOC107585037	Ras-related protein Rab-3A-like isoform X1. (220 aa)
	LOC107586662	Syntaxin-11-like. (293 aa)
	ENSSGRP00000096803	Ras-related protein Rab-3D-like. (123 aa)
	ENSSGRP00000095728	Syntaxin 12. (112 aa)
	ENSSGRP00000095582	Unc-13 homolog A (C. elegans). (1487 aa)
	ENSSGRP00000093193	Exocyst complex component 2-like. (900 aa)
	ENSSGRP00000091260	Battenin-like isoform X1. (445 aa)
	ENSSGRP00000090519	annotation not available (1116 aa)
	ENSSGRP00000089815	annotation not available (1555 aa)
	LOC107554194	Syntaxin-16-like. (303 aa)
	ENSSGRP00000088302	Syntaxin-12-like. (229 aa)
	LOC107553558	Ras-related protein Rab-3A. (227 aa)
	ENSSGRP00000084628	Exocyst complex component 2. (903 aa)
	LOC107563326	Syntaxin-binding protein 2-like. (616 aa)
	LOC107550402	Ras-related protein Rab-10-like. (183 aa)
	ENSSGRP00000083958	Syntaxin-17-like. (68 aa)
	LOC107556142	Syntaxin-11-like. (295 aa)
	LOC107556141	Syntaxin-11-like. (291 aa)
	ENSSGRP00000081388	Coiled-coil domain-containing protein 41. (698 aa)
	ENSSGRP00000080148	Coiled-coil domain-containing protein 41. (722 aa)
	ENSSGRP00000078959	Ras-related protein Rab-8A-like. (117 aa)
	rab12	Ras-related protein Rab-12. (235 aa)
	ENSSGRP00000077257	annotation not available (296 aa)
	LOC107550248	Ras-related protein Rab-3D-like. (220 aa)
	STX19	Syntaxin 11. (291 aa)
	LOC107569362	Syntaxin-8-like isoform X1. (236 aa)
	LOC107552638	Syntaxin 1B/2/3. (354 aa)
	SCFD2-2	Sec1 family domain-containing protein 2-like isoform X1. (688 aa)
	LOC107555115	Syntaxin-2-like isoform X1. (309 aa)
	ENSSGRP00000074801	Syntaxin 1B/2/3. (276 aa)
	LOC107596789	Syntaxin-16-like isoform X1. (324 aa)
	LOC107550224	Ras-related protein Rab-8B-like. (207 aa)
	LOC107550615	Ras-related protein Rab-3A-like isoform X1. (231 aa)
	LOC107554065	Syntaxin-4-like isoform X1. (315 aa)
	ENSSGRP00000072225	annotation not available (2024 aa)
	LOC107562698	Vacuolar protein sorting-associated protein 18 homolog. (975 aa)
	Stx1a	Syntaxin-1A isoform X1. (303 aa)
	Stx6	Syntaxin 6. (259 aa)
	ENSSGRP00000070435	annotation not available (118 aa)
	LOC107559419	Syntaxin-5-like. (347 aa)
	ENSSGRP00000066196	annotation not available (188 aa)
	ENSSGRP00000066186	Unc-13 homolog Ba (C. elegans). (1903 aa)
	ENSSGRP00000063684	annotation not available (133 aa)
	ENSSGRP00000057395	annotation not available (1555 aa)
	ENSSGRP00000056099	annotation not available (281 aa)
	LOC107593142	Ras-related protein Rab-8B-like. (207 aa)
	LOC107599464	Ras-related protein Rab-3B-like. (123 aa)
	ENSSGRP00000052367	RAB15, member RAS oncogene family. (184 aa)
	ENSSGRP00000050955	Syntaxin-3-like. (195 aa)
	ENSSGRP00000050782	Pleckstrin-like. (404 aa)
	LOC107581771	Battenin-like. (393 aa)
	LOC107594135	Syntaxin-11-like. (293 aa)
	ENSSGRP00000049907	Syntaxin-12-like. (267 aa)
	LOC107555552	Exocyst complex component 4-like. (971 aa)
	ENSSGRP00000048043	Protein unc-13 homolog B-like. (4832 aa)
	UNC13B	Protein unc-13 homolog B-like. (1243 aa)
	LOC107588528	Vacuolar protein sorting-associated protein 11 homolog isoform X1. (926 aa)
	LOC107585968	Ras-related protein Rab-8B. (207 aa)
	ENSSGRP00000041441	Syntaxin-binding protein 2-like. (628 aa)
	stx1b	Syntaxin 1B/2/3. (296 aa)
	LOC107559282	Syntaxin-5-like. (336 aa)
	LOC107598845	Ras-related protein Rab-8B-like. (207 aa)
	ENSSGRP00000040205	Syntaxin-binding protein 1. (591 aa)
	ENSSGRP00000039465	annotation not available (88 aa)
	LOC107556082	Syntaxin-6-like. (247 aa)
	LOC107581685	Syntaxin-12-like. (265 aa)
	ENSSGRP00000032659	USO1 vesicle transport factor. (818 aa)
	ENSSGRP00000031321	annotation not available (312 aa)
	ENSSGRP00000030205	Rab9 effector protein with kelch motifs-like. (146 aa)
	ENSSGRP00000028572	annotation not available (215 aa)
	ENSSGRP00000027484	GTP-binding protein Rab-3D-like. (212 aa)
	ENSSGRP00000027086	Pleckstrin-like. (354 aa)
	SCFD2	Sec1 family domain-containing protein 2-like isoform X1. (549 aa)
	ENSSGRP00000025090	Vacuolar protein sorting-associated protein 11 homolog. (946 aa)
	LOC107585070	Exocyst complex component 4-like. (993 aa)
	G3bp2	Ras GTPase-activating protein-binding protein 2. (863 aa)
	ENSSGRP00000021163	Ras-related protein Rab-12-like. (231 aa)
	LOC107560235	Syntaxin-binding protein 1-like. (616 aa)
	LOC107597148	Ras-related protein Rab-3A-like. (226 aa)
	rab3c	Ras-related protein Rab-3C. (224 aa)
	LOC107571803	Syntaxin-binding protein 3-like isoform X1. (615 aa)
	LOC107582080	Ras-related protein Rab-13. (201 aa)
	LOC107569532	GTP-binding protein Rab-3D-like. (222 aa)
	LOC107573539	Syntaxin-2-like isoform X1. (309 aa)
	LOC107587321	Syntaxin-binding protein 1-like. (615 aa)
	ENSSGRP00000011768	Syntaxin-12-like. (199 aa)
	LOC107552687	Ras-related protein Rab-8A. (84 aa)
	LOC107599832	Ras-related protein Rab-3C-like. (281 aa)
	LOC107566207	Syntaxin-2-like isoform X1. (276 aa)
	LOC107577280	Syntaxin-11-like. (295 aa)
	LOC107577278	Syntaxin-11-like. (291 aa)
	LOC107577801	Syntaxin-5-like. (178 aa)
	ENSSGRP00000007867	T-SNARE domain-containing protein 1-like. (241 aa)
	ENSSGRP00000004402	Ras-related protein Rab-8A-like. (117 aa)
	RAB3C	RAB3C, member RAS oncogene family. (211 aa)
	ENSSGRP00000002278	Rab9 effector protein with kelch motifs. (212 aa)
	ENSSGRP00000000339	annotation not available (248 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000000339	ENSSGRP00000011768	ENSSGRP00000000339	ENSSGRP00000011768	annotation not available	Syntaxin-12-like.	0.403
ENSSGRP00000000339	ENSSGRP00000040205	ENSSGRP00000000339	ENSSGRP00000040205	annotation not available	Syntaxin-binding protein 1.	0.761
ENSSGRP00000000339	ENSSGRP00000041441	ENSSGRP00000000339	ENSSGRP00000041441	annotation not available	Syntaxin-binding protein 2-like.	0.761
ENSSGRP00000000339	ENSSGRP00000048043	ENSSGRP00000000339	ENSSGRP00000048043	annotation not available	Protein unc-13 homolog B-like.	0.535
ENSSGRP00000000339	ENSSGRP00000049907	ENSSGRP00000000339	ENSSGRP00000049907	annotation not available	Syntaxin-12-like.	0.403
ENSSGRP00000000339	ENSSGRP00000057395	ENSSGRP00000000339	ENSSGRP00000057395	annotation not available	annotation not available	0.535
ENSSGRP00000000339	ENSSGRP00000066186	ENSSGRP00000000339	ENSSGRP00000066186	annotation not available	Unc-13 homolog Ba (C. elegans).	0.535
ENSSGRP00000000339	ENSSGRP00000070435	ENSSGRP00000000339	ENSSGRP00000070435	annotation not available	annotation not available	0.621
ENSSGRP00000000339	ENSSGRP00000072225	ENSSGRP00000000339	ENSSGRP00000072225	annotation not available	annotation not available	0.535
ENSSGRP00000000339	ENSSGRP00000083958	ENSSGRP00000000339	ENSSGRP00000083958	annotation not available	Syntaxin-17-like.	0.420
ENSSGRP00000000339	ENSSGRP00000088302	ENSSGRP00000000339	ENSSGRP00000088302	annotation not available	Syntaxin-12-like.	0.403
ENSSGRP00000000339	ENSSGRP00000089815	ENSSGRP00000000339	ENSSGRP00000089815	annotation not available	annotation not available	0.535
ENSSGRP00000000339	ENSSGRP00000090519	ENSSGRP00000000339	ENSSGRP00000090519	annotation not available	annotation not available	0.535
ENSSGRP00000000339	ENSSGRP00000095582	ENSSGRP00000000339	ENSSGRP00000095582	annotation not available	Unc-13 homolog A (C. elegans).	0.535
ENSSGRP00000000339	ENSSGRP00000095728	ENSSGRP00000000339	ENSSGRP00000095728	annotation not available	Syntaxin 12.	0.403
ENSSGRP00000000339	ENSSGRP00000099896	ENSSGRP00000000339	ENSSGRP00000099896	annotation not available	Si:ch211-240l19.7.	0.444
ENSSGRP00000000339	ENSSGRP00000101658	ENSSGRP00000000339	ENSSGRP00000101658	annotation not available	Syntaxin-17-like.	0.420
ENSSGRP00000000339	ENSSGRP00000101712	ENSSGRP00000000339	ENSSGRP00000101712	annotation not available	Syntaxin binding protein 1a.	0.761
ENSSGRP00000000339	ENSSGRP00000108082	ENSSGRP00000000339	ENSSGRP00000108082	annotation not available	annotation not available	0.535
ENSSGRP00000000339	ENSSGRP00000108088	ENSSGRP00000000339	ENSSGRP00000108088	annotation not available	Unc-13 homolog Ba (C. elegans).	0.535