(70 nodes) Embryonic viscerocranium morphogenesis network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000017087	RNA polymerase I and III subunit D. (101 aa)
	LOC107592160	Caspase-1-like. (391 aa)
	ENSSGRP00000010767	Activated leukocyte cell adhesion molecule. (635 aa)
	ENSSGRP00000010660	annotation not available (308 aa)
	LOC107567844	Lysyl oxidase-like protein 2/3/4. (469 aa)
	LOC107588329	Early growth response protein 1. (510 aa)
	ENSSGRP00000002492	LOW QUALITY PROTEIN: nipped-B-like protein B. (256 aa)
	ENSSGRP00000002159	annotation not available (384 aa)
	ENSSGRP00000000322	Lysyl oxidase-like 3b. (770 aa)
	LOC107591663	Homeobox protein Dlx5a-like. (283 aa)
	LOC107593250	Bone morphogenetic protein 2-like. (411 aa)
	LOC107550703	Tiggy-winkle hedgehog protein-like. (416 aa)
	LOC107592120	Double-strand-break repair protein rad21 homolog isoform X1. (635 aa)
	LOC107588237	Homeobox protein Dlx2a. (274 aa)
	LOC107588239	Homeobox protein Dlx1a-like. (250 aa)
	ENSSGRP00000100208	Double-strand-break repair protein rad21 homolog. (646 aa)
	tbx1	T-box transcription factor TBX1 isoform X1. (519 aa)
	LOC107597537	Activated leukocyte cell adhesion molecule. (557 aa)
	LOC107554690	Mediator of RNA polymerase II transcription subunit 12. (2073 aa)
	LOC107591009	Sonic hedgehog protein A-like. (418 aa)
	LOC107596814	Sphingosine 1-phosphate receptor 2-like. (370 aa)
	LOC107591962	Double-strand-break repair protein rad21 homolog isoform X1. (637 aa)
	mmachc	Cyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase. (259 aa)
	LOC107557343	Homeobox protein Dlx3b-like. (269 aa)
	LOC107557342	Homeobox protein Dlx4b isoform X1. (255 aa)
	LOC107599173	Follistatin-A isoform X1. (349 aa)
	dlx1	Homeobox protein DLX1/4/6. (252 aa)
	dlx2	Homeobox protein DLX-2. (271 aa)
	LOC107582399	Wingless-type MMTV integration site family, member 4. (352 aa)
	ENSSGRP00000076066	Neuroblastoma-amplified sequence. (1882 aa)
	LOC107586383	Tiggy-winkle hedgehog protein. (416 aa)
	Gnptab	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta. (1099 aa)
	dlx5	Homeobox protein DLX-5. (283 aa)
	LOC107598678	Homeobox protein Dlx3b. (269 aa)
	LOC107552491	Heart- and neural crest derivatives-expressed protein 2. (208 aa)
	LOC107556063	Sonic hedgehog protein A. (418 aa)
	LOC107563633	[histone H3]-dimethyl-L-lysine9 demethylase. (1033 aa)
	ENSSGRP00000055564	annotation not available (498 aa)
	bmp2	Bone morphogenetic protein 2. (388 aa)
	ENSSGRP00000054226	NIPBL cohesin loading factor a. (2321 aa)
	LOC107602023	Follistatin-A-like isoform X1. (346 aa)
	pitx2	Paired-like homeodomain transcription factor 2. (311 aa)
	LOC107572035	Wingless-type MMTV integration site family, member 5. (380 aa)
	ENSSGRP00000050347	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta-like. (149 aa)
	LOC107553896	Wingless-type MMTV integration site family, member 5. (374 aa)
	nipbl	Cohesin loading factor subunit SCC2. (2723 aa)
	ENSSGRP00000046429	Double-strand-break repair protein rad21 homolog. (634 aa)
	ENSSGRP00000045001	Paired-like homeodomain transcription factor 2. (311 aa)
	ENSSGRP00000044449	Heart- and neural crest derivatives-expressed protein 2-like. (208 aa)
	ENSSGRP00000040199	Mediator complex subunit 12. (1828 aa)
	ENSSGRP00000038808	Nipped-B-like protein B. (2402 aa)
	LOC107587933	Sphingosine 1-phosphate receptor 2. (370 aa)
	ENSSGRP00000036904	T-box transcription factor 1. (434 aa)
	LOC107557684	Early growth response protein 1-like. (509 aa)
	LOC107552890	Bone morphogenetic protein 2-like. (388 aa)
	LOC107570904	Caspase-1-A-like. (385 aa)
	LOC107565731	Wingless-type MMTV integration site family, member 4. (352 aa)
	ENSSGRP00000034416	Caspase-1-like. (393 aa)
	LOC107594572	Cohesin loading factor subunit SCC2. (2328 aa)
	LOC107571421	Caspase-1-A-like isoform X1. (402 aa)
	ENSSGRP00000027136	Double-strand-break repair protein rad21-like protein 1. (453 aa)
	ENSSGRP00000023758	Caspase-1-A-like. (374 aa)
	ENSSGRP00000023653	Activated leukocyte cell adhesion molecule. (557 aa)
	LOC107581671	Noggin-3-like. (223 aa)
	ENSSGRP00000022067	Bone morphogenetic protein 2-like. (332 aa)
	ENSSGRP00000018200	Caspase-1-A-like. (386 aa)
	LOC107548884	Activated leukocyte cell adhesion molecule. (564 aa)
	LOC107570386	[histone H3]-dimethyl-L-lysine9 demethylase. (1032 aa)
	LOC107595577	Follistatin-A-like isoform X1. (319 aa)
	LOC107597631	Follistatin-A-like isoform X1. (344 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002492	ENSSGRP00000027136	ENSSGRP00000002492	ENSSGRP00000027136	LOW QUALITY PROTEIN: nipped-B-like protein B.	Double-strand-break repair protein rad21-like protein 1.	0.905
ENSSGRP00000002492	ENSSGRP00000046429	ENSSGRP00000002492	ENSSGRP00000046429	LOW QUALITY PROTEIN: nipped-B-like protein B.	Double-strand-break repair protein rad21 homolog.	0.905
ENSSGRP00000002492	ENSSGRP00000100208	ENSSGRP00000002492	ENSSGRP00000100208	LOW QUALITY PROTEIN: nipped-B-like protein B.	Double-strand-break repair protein rad21 homolog.	0.940
ENSSGRP00000002492	LOC107591962	ENSSGRP00000002492	ENSSGRP00000087705	LOW QUALITY PROTEIN: nipped-B-like protein B.	Double-strand-break repair protein rad21 homolog isoform X1.	0.905
ENSSGRP00000002492	LOC107592120	ENSSGRP00000002492	ENSSGRP00000107114	LOW QUALITY PROTEIN: nipped-B-like protein B.	Double-strand-break repair protein rad21 homolog isoform X1.	0.940
ENSSGRP00000010660	ENSSGRP00000022067	ENSSGRP00000010660	ENSSGRP00000022067	annotation not available	Bone morphogenetic protein 2-like.	0.444
ENSSGRP00000010660	LOC107552890	ENSSGRP00000010660	ENSSGRP00000035716	annotation not available	Bone morphogenetic protein 2-like.	0.432
ENSSGRP00000010660	LOC107565731	ENSSGRP00000010660	ENSSGRP00000034966	annotation not available	Wingless-type MMTV integration site family, member 4.	0.418
ENSSGRP00000010660	LOC107581671	ENSSGRP00000010660	ENSSGRP00000022374	annotation not available	Noggin-3-like.	0.593
ENSSGRP00000010660	LOC107582399	ENSSGRP00000010660	ENSSGRP00000078831	annotation not available	Wingless-type MMTV integration site family, member 4.	0.418
ENSSGRP00000010660	LOC107593250	ENSSGRP00000010660	ENSSGRP00000108210	annotation not available	Bone morphogenetic protein 2-like.	0.444
ENSSGRP00000010660	bmp2	ENSSGRP00000010660	ENSSGRP00000055548	annotation not available	Bone morphogenetic protein 2.	0.432
ENSSGRP00000022067	ENSSGRP00000010660	ENSSGRP00000022067	ENSSGRP00000010660	Bone morphogenetic protein 2-like.	annotation not available	0.444
ENSSGRP00000022067	LOC107581671	ENSSGRP00000022067	ENSSGRP00000022374	Bone morphogenetic protein 2-like.	Noggin-3-like.	0.959
ENSSGRP00000022067	LOC107591663	ENSSGRP00000022067	ENSSGRP00000109298	Bone morphogenetic protein 2-like.	Homeobox protein Dlx5a-like.	0.468
ENSSGRP00000022067	LOC107595577	ENSSGRP00000022067	ENSSGRP00000017515	Bone morphogenetic protein 2-like.	Follistatin-A-like isoform X1.	0.484
ENSSGRP00000022067	LOC107597631	ENSSGRP00000022067	ENSSGRP00000015855	Bone morphogenetic protein 2-like.	Follistatin-A-like isoform X1.	0.484
ENSSGRP00000022067	LOC107599173	ENSSGRP00000022067	ENSSGRP00000081081	Bone morphogenetic protein 2-like.	Follistatin-A isoform X1.	0.444
ENSSGRP00000022067	LOC107602023	ENSSGRP00000022067	ENSSGRP00000054115	Bone morphogenetic protein 2-like.	Follistatin-A-like isoform X1.	0.444
ENSSGRP00000022067	dlx5	ENSSGRP00000022067	ENSSGRP00000072658	Bone morphogenetic protein 2-like.	Homeobox protein DLX-5.	0.468