(34 nodes) Induction of positive chemotaxis network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000059495	Pro-interleukin-16-like. (848 aa)
	ENSSGRP00000045590	annotation not available (125 aa)
	ENSSGRP00000047412	Placenta growth factor-like. (102 aa)
	LOC107558832	Secretogranin-2-like. (598 aa)
	LOC107579734	Neurotrophin-3-like. (261 aa)
	ENSSGRP00000059493	Interleukin 16. (481 aa)
	Artn	Artemin. (115 aa)
	ENSSGRP00000065083	Vascular endothelial growth factor c. (385 aa)
	ENSSGRP00000070432	Vascular endothelial growth factor Ba. (134 aa)
	LOC107588617	Stromal cell-derived factor 1-like isoform X1. (99 aa)
	LOC107566675	Stromal cell-derived factor 1-like. (97 aa)
	LOC107599998	Cyclic AMP-responsive element-binding protein 3-like protein 3. (480 aa)
	ENSSGRP00000077405	Secretogranin-2-like. (618 aa)
	ENSSGRP00000078393	Vascular endothelial growth factor A-A-like isoform X1. (139 aa)
	ENSSGRP00000080286	Artemin-like. (146 aa)
	ENSSGRP00000086813	Neurturin-like. (146 aa)
	LOC107584056	Neurotrophin-3-like. (261 aa)
	ENSSGRP00000089853	Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1). (90 aa)
	LOC107552495	Secretogranin-2-like isoform X1. (585 aa)
	LOC107552496	Secretogranin-2-like isoform X1. (585 aa)
	ENSSGRP00000098207	annotation not available (204 aa)
	ENSSGRP00000105794	Vascular endothelial growth factor Bb. (105 aa)
	LOC107569323	Vascular endothelial growth factor D-like isoform X1. (271 aa)
	LOC107566036	Stromal cell-derived factor 1-like. (97 aa)
	ENSSGRP00000004941	Pro-interleukin-16-like. (639 aa)
	ENSSGRP00000004950	annotation not available (138 aa)
	LOC107580477	Cyclic AMP-responsive element-binding protein 3-like protein 3. (235 aa)
	LOC107585745	Secretogranin-2-like. (602 aa)
	ENSSGRP00000014674	annotation not available (126 aa)
	CREB3L4	Cyclic AMP-responsive element-binding protein 3-like protein 4. (371 aa)
	LOC107556455	Vascular endothelial growth factor D-like. (271 aa)
	ENSSGRP00000038051	Neurturin-like. (148 aa)
	ENSSGRP00000040663	Vascular endothelial growth factor Ba. (181 aa)
	LOC107558783	Vascular endothelial growth factor C-like isoform X1. (397 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Artn	ENSSGRP00000038051	ENSSGRP00000061991	ENSSGRP00000038051	Artemin.	Neurturin-like.	0.434
Artn	ENSSGRP00000080286	ENSSGRP00000061991	ENSSGRP00000080286	Artemin.	Artemin-like.	0.440
Artn	ENSSGRP00000086813	ENSSGRP00000061991	ENSSGRP00000086813	Artemin.	Neurturin-like.	0.439
Artn	LOC107579734	ENSSGRP00000061991	ENSSGRP00000056184	Artemin.	Neurotrophin-3-like.	0.479
Artn	LOC107584056	ENSSGRP00000061991	ENSSGRP00000088041	Artemin.	Neurotrophin-3-like.	0.479
ENSSGRP00000004941	ENSSGRP00000059495	ENSSGRP00000004941	ENSSGRP00000059495	Pro-interleukin-16-like.	Pro-interleukin-16-like.	0.900
ENSSGRP00000014674	ENSSGRP00000040663	ENSSGRP00000014674	ENSSGRP00000040663	annotation not available	Vascular endothelial growth factor Ba.	0.532
ENSSGRP00000014674	ENSSGRP00000065083	ENSSGRP00000014674	ENSSGRP00000065083	annotation not available	Vascular endothelial growth factor c.	0.662
ENSSGRP00000014674	ENSSGRP00000070432	ENSSGRP00000014674	ENSSGRP00000070432	annotation not available	Vascular endothelial growth factor Ba.	0.532
ENSSGRP00000014674	ENSSGRP00000078393	ENSSGRP00000014674	ENSSGRP00000078393	annotation not available	Vascular endothelial growth factor A-A-like isoform X1.	0.512
ENSSGRP00000014674	ENSSGRP00000098207	ENSSGRP00000014674	ENSSGRP00000098207	annotation not available	annotation not available	0.512
ENSSGRP00000014674	ENSSGRP00000105794	ENSSGRP00000014674	ENSSGRP00000105794	annotation not available	Vascular endothelial growth factor Bb.	0.532
ENSSGRP00000014674	LOC107556455	ENSSGRP00000014674	ENSSGRP00000034797	annotation not available	Vascular endothelial growth factor D-like.	0.500
ENSSGRP00000014674	LOC107558783	ENSSGRP00000014674	ENSSGRP00000044610	annotation not available	Vascular endothelial growth factor C-like isoform X1.	0.662
ENSSGRP00000014674	LOC107569323	ENSSGRP00000014674	ENSSGRP00000110967	annotation not available	Vascular endothelial growth factor D-like isoform X1.	0.500
ENSSGRP00000038051	Artn	ENSSGRP00000038051	ENSSGRP00000061991	Neurturin-like.	Artemin.	0.434
ENSSGRP00000040663	ENSSGRP00000014674	ENSSGRP00000040663	ENSSGRP00000014674	Vascular endothelial growth factor Ba.	annotation not available	0.532
ENSSGRP00000040663	ENSSGRP00000045590	ENSSGRP00000040663	ENSSGRP00000045590	Vascular endothelial growth factor Ba.	annotation not available	0.532
ENSSGRP00000040663	ENSSGRP00000047412	ENSSGRP00000040663	ENSSGRP00000047412	Vascular endothelial growth factor Ba.	Placenta growth factor-like.	0.532
ENSSGRP00000040663	ENSSGRP00000065083	ENSSGRP00000040663	ENSSGRP00000065083	Vascular endothelial growth factor Ba.	Vascular endothelial growth factor c.	0.640