(16 nodes) Radial glial cell differentiation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107595277	N6-adenosine-methyltransferase subunit METTL3. (587 aa)
	ENSSGRP00000005304	Neurogenic locus notch homolog protein 1-like. (182 aa)
	ENSSGRP00000005459	Neurogenic locus notch homolog protein 1-like. (248 aa)
	LOC107594427	Lymphoid enhancer-binding factor 1-like. (371 aa)
	ENSSGRP00000013552	Probable G-protein coupled receptor 157. (339 aa)
	LOC107593368	Probable G-protein coupled receptor 157. (337 aa)
	Lef1	Lymphoid enhancer-binding factor 1. (343 aa)
	LOC107560293	N6-adenosine-methyltransferase subunit METTL3-like isoform X1. (582 aa)
	ENSSGRP00000048421	Neurogenic locus notch homolog protein 1. (2408 aa)
	ENSSGRP00000068938	Neurogenic locus notch homolog protein 1-like isoform X1. (2440 aa)
	ENSSGRP00000085966	Methyltransferase like 14. (379 aa)
	ENSSGRP00000109007	Notch receptor 1b. (2380 aa)
	LOC107591586	N6-adenosine-methyltransferase subunit METTL14-like. (356 aa)
	Notch1	Neurogenic locus notch homolog protein 1. (2140 aa)
	LOC107591585	MRNA m6A methyltransferase non-catalytic subunit. (456 aa)
	ENSSGRP00000043047	Meteorin-like. (269 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005304	LOC107594427	ENSSGRP00000005304	ENSSGRP00000010679	Neurogenic locus notch homolog protein 1-like.	Lymphoid enhancer-binding factor 1-like.	0.458
ENSSGRP00000005304	Lef1	ENSSGRP00000005304	ENSSGRP00000023486	Neurogenic locus notch homolog protein 1-like.	Lymphoid enhancer-binding factor 1.	0.458
ENSSGRP00000005459	LOC107594427	ENSSGRP00000005459	ENSSGRP00000010679	Neurogenic locus notch homolog protein 1-like.	Lymphoid enhancer-binding factor 1-like.	0.458
ENSSGRP00000005459	Lef1	ENSSGRP00000005459	ENSSGRP00000023486	Neurogenic locus notch homolog protein 1-like.	Lymphoid enhancer-binding factor 1.	0.458
ENSSGRP00000048421	LOC107594427	ENSSGRP00000048421	ENSSGRP00000010679	Neurogenic locus notch homolog protein 1.	Lymphoid enhancer-binding factor 1-like.	0.458
ENSSGRP00000048421	Lef1	ENSSGRP00000048421	ENSSGRP00000023486	Neurogenic locus notch homolog protein 1.	Lymphoid enhancer-binding factor 1.	0.458
ENSSGRP00000068938	LOC107594427	ENSSGRP00000068938	ENSSGRP00000010679	Neurogenic locus notch homolog protein 1-like isoform X1.	Lymphoid enhancer-binding factor 1-like.	0.458
ENSSGRP00000068938	Lef1	ENSSGRP00000068938	ENSSGRP00000023486	Neurogenic locus notch homolog protein 1-like isoform X1.	Lymphoid enhancer-binding factor 1.	0.458
ENSSGRP00000085966	LOC107560293	ENSSGRP00000085966	ENSSGRP00000024718	Methyltransferase like 14.	N6-adenosine-methyltransferase subunit METTL3-like isoform X1.	0.983
ENSSGRP00000085966	LOC107595277	ENSSGRP00000085966	ENSSGRP00000082773	Methyltransferase like 14.	N6-adenosine-methyltransferase subunit METTL3.	0.983
ENSSGRP00000109007	LOC107594427	ENSSGRP00000109007	ENSSGRP00000010679	Notch receptor 1b.	Lymphoid enhancer-binding factor 1-like.	0.458
ENSSGRP00000109007	Lef1	ENSSGRP00000109007	ENSSGRP00000023486	Notch receptor 1b.	Lymphoid enhancer-binding factor 1.	0.458
LOC107560293	ENSSGRP00000085966	ENSSGRP00000024718	ENSSGRP00000085966	N6-adenosine-methyltransferase subunit METTL3-like isoform X1.	Methyltransferase like 14.	0.983
LOC107560293	LOC107591585	ENSSGRP00000024718	ENSSGRP00000097947	N6-adenosine-methyltransferase subunit METTL3-like isoform X1.	MRNA m6A methyltransferase non-catalytic subunit.	0.983
LOC107560293	LOC107591586	ENSSGRP00000024718	ENSSGRP00000097948	N6-adenosine-methyltransferase subunit METTL3-like isoform X1.	N6-adenosine-methyltransferase subunit METTL14-like.	0.983
LOC107591585	LOC107560293	ENSSGRP00000097947	ENSSGRP00000024718	MRNA m6A methyltransferase non-catalytic subunit.	N6-adenosine-methyltransferase subunit METTL3-like isoform X1.	0.983
LOC107591585	LOC107595277	ENSSGRP00000097947	ENSSGRP00000082773	MRNA m6A methyltransferase non-catalytic subunit.	N6-adenosine-methyltransferase subunit METTL3.	0.983
LOC107591586	LOC107560293	ENSSGRP00000097948	ENSSGRP00000024718	N6-adenosine-methyltransferase subunit METTL14-like.	N6-adenosine-methyltransferase subunit METTL3-like isoform X1.	0.983
LOC107591586	LOC107595277	ENSSGRP00000097948	ENSSGRP00000082773	N6-adenosine-methyltransferase subunit METTL14-like.	N6-adenosine-methyltransferase subunit METTL3.	0.983
LOC107594427	ENSSGRP00000005304	ENSSGRP00000010679	ENSSGRP00000005304	Lymphoid enhancer-binding factor 1-like.	Neurogenic locus notch homolog protein 1-like.	0.458