(63 nodes) Convergent extension involved in gastrulation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tab2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1. (744 aa)
	ENSSGRP00000084080	Inversin-like. (1052 aa)
	LOC107596814	Sphingosine 1-phosphate receptor 2-like. (370 aa)
	LOC107568336	Cadherin 2, type 1, N-cadherin. (908 aa)
	ENSSGRP00000091770	Cadherin 2, type 1, N-cadherin. (916 aa)
	lrrc1	Leucine-rich repeat-containing protein 1. (528 aa)
	ENSSGRP00000094528	Scribble planar cell polarity protein. (1755 aa)
	ENSSGRP00000097934	Protein tilB homolog. (426 aa)
	LOC107564525	Calcium uniporter protein, mitochondrial. (378 aa)
	ENSSGRP00000101696	Inversin-like. (1033 aa)
	chrd	Chordin. (938 aa)
	ENSSGRP00000107384	FYN proto-oncogene, Src family tyrosine kinase b. (537 aa)
	LOC107581355	Transmembrane protein 237B isoform X1. (397 aa)
	LOC107593250	Bone morphogenetic protein 2-like. (411 aa)
	ENSSGRP00000110446	Transmembrane protein 237A-like isoform X1. (270 aa)
	ENSSGRP00000094227	annotation not available (210 aa)
	ENSSGRP00000003802	Scribble planar cell polarity protein. (1807 aa)
	LOC107550223	Differentially expressed in FDCP 6 homolog. (613 aa)
	ENSSGRP00000006139	annotation not available (120 aa)
	ENSSGRP00000018720	[histone H3]-lysine9 N-trimethyltransferase SETDB2. (450 aa)
	LOC107587845	Desumoylating isopeptidase 2. (196 aa)
	ENSSGRP00000022067	Bone morphogenetic protein 2-like. (332 aa)
	LOC107597704	Leucine-rich repeat-containing protein 1-like. (526 aa)
	tdp2	Tyrosyl-DNA phosphodiesterase 2. (391 aa)
	LOC107552892	Growth differentiation factor 3. (372 aa)
	LOC107552890	Bone morphogenetic protein 2-like. (388 aa)
	ENSSGRP00000036217	annotation not available (113 aa)
	ENSSGRP00000036219	Mothers against decapentaplegic homolog 1-like. (181 aa)
	ENSSGRP00000037000	annotation not available (144 aa)
	LOC107587933	Sphingosine 1-phosphate receptor 2. (370 aa)
	ENSSGRP00000040612	Dynein, axonemal, assembly factor 1. (517 aa)
	LOC107551352	Calcium uniporter protein, mitochondrial-like. (378 aa)
	ENSSGRP00000041345	Chordin-like. (861 aa)
	Vangl2	Vang-like protein 2. (440 aa)
	ENSSGRP00000042478	Vang-like protein 2. (279 aa)
	LOC107558136	Tyrosine-protein kinase yes-like. (547 aa)
	LOC107585270	Desumoylating isopeptidase 2-like. (189 aa)
	LOC107559304	Guanine nucleotide-binding protein subunit beta-2-like 1 protein. (317 aa)
	LOC107555562	Tyrosyl-DNA phosphodiesterase 2-like. (386 aa)
	ENSSGRP00000050128	annotation not available (167 aa)
	LOC107553896	Wingless-type MMTV integration site family, member 5. (374 aa)
	LOC107572035	Wingless-type MMTV integration site family, member 5. (380 aa)
	LOC107599381	Guanine nucleotide-binding protein subunit beta-2-like 1 protein. (317 aa)
	ENSSGRP00000051020	Oral-facial-digital syndrome 1 protein homolog. (830 aa)
	LOC107563595	Mothers against decapentaplegic homolog 5 isoform X1. (464 aa)
	ENSSGRP00000055544	Growth differentiation factor 3. (295 aa)
	bmp2	Bone morphogenetic protein 2. (388 aa)
	Adgra3	Adhesion G protein-coupled receptor A3. (1345 aa)
	ENSSGRP00000057639	Dynein, axonemal, assembly factor 1. (235 aa)
	ENSSGRP00000058543	Transmembrane protein 237b. (426 aa)
	ENSSGRP00000059802	Transmembrane protein 216. (178 aa)
	LOC107599059	Differentially expressed in FDCP 6 homolog. (614 aa)
	LOC107548453	Wingless-type MMTV integration site family, member 11. (353 aa)
	LOC107571545	Cadherin 2, type 1, N-cadherin. (966 aa)
	ADGRA3	Adhesion G protein-coupled receptor A3-like. (1073 aa)
	TAB2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like. (666 aa)
	LOC107583469	Tyrosine-protein kinase fyna. (537 aa)
	ENSSGRP00000069253	Tyrosine-protein kinase Yes. (574 aa)
	LOC107564973	Tyrosine-protein kinase fyna-like. (490 aa)
	LOC107596154	Wingless-type MMTV integration site family, member 11. (352 aa)
	ENSSGRP00000075445	FYN proto-oncogene, Src family tyrosine kinase b. (530 aa)
	ENSSGRP00000075918	Protein tilB homolog. (444 aa)
	LOC107587078	Guanine nucleotide-binding protein subunit beta-2-like 1 protein. (317 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003802	ENSSGRP00000042478	ENSSGRP00000003802	ENSSGRP00000042478	Scribble planar cell polarity protein.	Vang-like protein 2.	0.725
ENSSGRP00000003802	Vangl2	ENSSGRP00000003802	ENSSGRP00000042474	Scribble planar cell polarity protein.	Vang-like protein 2.	0.725
ENSSGRP00000006139	ENSSGRP00000037000	ENSSGRP00000006139	ENSSGRP00000037000	annotation not available	annotation not available	0.607
ENSSGRP00000006139	ENSSGRP00000059802	ENSSGRP00000006139	ENSSGRP00000059802	annotation not available	Transmembrane protein 216.	0.607
ENSSGRP00000006139	ENSSGRP00000084080	ENSSGRP00000006139	ENSSGRP00000084080	annotation not available	Inversin-like.	0.492
ENSSGRP00000006139	ENSSGRP00000101696	ENSSGRP00000006139	ENSSGRP00000101696	annotation not available	Inversin-like.	0.492
ENSSGRP00000022067	ENSSGRP00000036217	ENSSGRP00000022067	ENSSGRP00000036217	Bone morphogenetic protein 2-like.	annotation not available	0.755
ENSSGRP00000022067	ENSSGRP00000036219	ENSSGRP00000022067	ENSSGRP00000036219	Bone morphogenetic protein 2-like.	Mothers against decapentaplegic homolog 1-like.	0.699
ENSSGRP00000022067	ENSSGRP00000041345	ENSSGRP00000022067	ENSSGRP00000041345	Bone morphogenetic protein 2-like.	Chordin-like.	0.902
ENSSGRP00000022067	LOC107563595	ENSSGRP00000022067	ENSSGRP00000051610	Bone morphogenetic protein 2-like.	Mothers against decapentaplegic homolog 5 isoform X1.	0.699
ENSSGRP00000022067	chrd	ENSSGRP00000022067	ENSSGRP00000106203	Bone morphogenetic protein 2-like.	Chordin.	0.902
ENSSGRP00000036217	ENSSGRP00000022067	ENSSGRP00000036217	ENSSGRP00000022067	annotation not available	Bone morphogenetic protein 2-like.	0.755
ENSSGRP00000036217	ENSSGRP00000036219	ENSSGRP00000036217	ENSSGRP00000036219	annotation not available	Mothers against decapentaplegic homolog 1-like.	0.498
ENSSGRP00000036217	ENSSGRP00000041345	ENSSGRP00000036217	ENSSGRP00000041345	annotation not available	Chordin-like.	0.458
ENSSGRP00000036217	LOC107552890	ENSSGRP00000036217	ENSSGRP00000035716	annotation not available	Bone morphogenetic protein 2-like.	0.627
ENSSGRP00000036217	LOC107593250	ENSSGRP00000036217	ENSSGRP00000108210	annotation not available	Bone morphogenetic protein 2-like.	0.699
ENSSGRP00000036217	bmp2	ENSSGRP00000036217	ENSSGRP00000055548	annotation not available	Bone morphogenetic protein 2.	0.627
ENSSGRP00000036217	chrd	ENSSGRP00000036217	ENSSGRP00000106203	annotation not available	Chordin.	0.458
ENSSGRP00000036219	ENSSGRP00000022067	ENSSGRP00000036219	ENSSGRP00000022067	Mothers against decapentaplegic homolog 1-like.	Bone morphogenetic protein 2-like.	0.699
ENSSGRP00000036219	ENSSGRP00000036217	ENSSGRP00000036219	ENSSGRP00000036217	Mothers against decapentaplegic homolog 1-like.	annotation not available	0.498