(16 nodes) Convergent extension involved in axis elongation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107577477	Brachyury protein homolog A. (276 aa)
	LOC107568470	Secreted frizzled-related protein 2-like. (308 aa)
	ENSSGRP00000099428	Protein phosphatase 1 regulatory subunit 12A-like. (178 aa)
	KLHL12-2	Kelch-like protein 12. (564 aa)
	LOC107550642	Brachyury protein homolog A-like. (417 aa)
	ENSSGRP00000092561	Kelch-like protein 23. (336 aa)
	ENSSGRP00000083129	Protein phosphatase 1, regulatory subunit 12A. (1072 aa)
	LOC107596154	Wingless-type MMTV integration site family, member 11. (352 aa)
	LOC107548453	Wingless-type MMTV integration site family, member 11. (353 aa)
	ENSSGRP00000053684	Protein phosphatase 1 regulatory subunit 12A-like. (726 aa)
	Sfrp2	Secreted frizzled-related protein 2. (308 aa)
	LOC107572035	Wingless-type MMTV integration site family, member 5. (380 aa)
	LOC107553896	Wingless-type MMTV integration site family, member 5. (374 aa)
	ENSSGRP00000042478	Vang-like protein 2. (279 aa)
	Vangl2	Vang-like protein 2. (440 aa)
	KLHL12	Kelch-like protein 12. (564 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000042478	LOC107548453	ENSSGRP00000042478	ENSSGRP00000062649	Vang-like protein 2.	Wingless-type MMTV integration site family, member 11.	0.581
ENSSGRP00000042478	LOC107553896	ENSSGRP00000042478	ENSSGRP00000050175	Vang-like protein 2.	Wingless-type MMTV integration site family, member 5.	0.755
ENSSGRP00000042478	LOC107568470	ENSSGRP00000042478	ENSSGRP00000022680	Vang-like protein 2.	Secreted frizzled-related protein 2-like.	0.419
ENSSGRP00000042478	LOC107572035	ENSSGRP00000042478	ENSSGRP00000050689	Vang-like protein 2.	Wingless-type MMTV integration site family, member 5.	0.766
ENSSGRP00000042478	LOC107596154	ENSSGRP00000042478	ENSSGRP00000073566	Vang-like protein 2.	Wingless-type MMTV integration site family, member 11.	0.581
ENSSGRP00000042478	Sfrp2	ENSSGRP00000042478	ENSSGRP00000053156	Vang-like protein 2.	Secreted frizzled-related protein 2.	0.454
LOC107548453	ENSSGRP00000042478	ENSSGRP00000062649	ENSSGRP00000042478	Wingless-type MMTV integration site family, member 11.	Vang-like protein 2.	0.581
LOC107548453	LOC107553896	ENSSGRP00000062649	ENSSGRP00000050175	Wingless-type MMTV integration site family, member 11.	Wingless-type MMTV integration site family, member 5.	0.585
LOC107548453	LOC107568470	ENSSGRP00000062649	ENSSGRP00000022680	Wingless-type MMTV integration site family, member 11.	Secreted frizzled-related protein 2-like.	0.831
LOC107548453	LOC107572035	ENSSGRP00000062649	ENSSGRP00000050689	Wingless-type MMTV integration site family, member 11.	Wingless-type MMTV integration site family, member 5.	0.585
LOC107548453	Sfrp2	ENSSGRP00000062649	ENSSGRP00000053156	Wingless-type MMTV integration site family, member 11.	Secreted frizzled-related protein 2.	0.864
LOC107548453	Vangl2	ENSSGRP00000062649	ENSSGRP00000042474	Wingless-type MMTV integration site family, member 11.	Vang-like protein 2.	0.581
LOC107553896	ENSSGRP00000042478	ENSSGRP00000050175	ENSSGRP00000042478	Wingless-type MMTV integration site family, member 5.	Vang-like protein 2.	0.755
LOC107553896	LOC107548453	ENSSGRP00000050175	ENSSGRP00000062649	Wingless-type MMTV integration site family, member 5.	Wingless-type MMTV integration site family, member 11.	0.585
LOC107553896	LOC107568470	ENSSGRP00000050175	ENSSGRP00000022680	Wingless-type MMTV integration site family, member 5.	Secreted frizzled-related protein 2-like.	0.885
LOC107553896	LOC107572035	ENSSGRP00000050175	ENSSGRP00000050689	Wingless-type MMTV integration site family, member 5.	Wingless-type MMTV integration site family, member 5.	0.917
LOC107553896	LOC107596154	ENSSGRP00000050175	ENSSGRP00000073566	Wingless-type MMTV integration site family, member 5.	Wingless-type MMTV integration site family, member 11.	0.585
LOC107553896	Sfrp2	ENSSGRP00000050175	ENSSGRP00000053156	Wingless-type MMTV integration site family, member 5.	Secreted frizzled-related protein 2.	0.913
LOC107553896	Vangl2	ENSSGRP00000050175	ENSSGRP00000042474	Wingless-type MMTV integration site family, member 5.	Vang-like protein 2.	0.755
LOC107568470	ENSSGRP00000042478	ENSSGRP00000022680	ENSSGRP00000042478	Secreted frizzled-related protein 2-like.	Vang-like protein 2.	0.419