STRINGSTRING
LOC107550511 LOC107550511 LOC107571117 LOC107571117 ercc1 ercc1 ENSSGRP00000105732 ENSSGRP00000105732 ENSSGRP00000107198 ENSSGRP00000107198 LOC107552599 LOC107552599 ENSSGRP00000006671 ENSSGRP00000006671 LOC107549540 LOC107549540 LOC107567477 LOC107567477 LOC107598375 LOC107598375 LOC107551382 LOC107551382 LOC107594597 LOC107594597 LOC107582103 LOC107582103 ENSSGRP00000089850 ENSSGRP00000089850 taf6 taf6 ENSSGRP00000018198 ENSSGRP00000018198 ENSSGRP00000019538 ENSSGRP00000019538 ENSSGRP00000023709 ENSSGRP00000023709 LOC107588503 LOC107588503 ENSSGRP00000089852 ENSSGRP00000089852 LOC107561045 LOC107561045 med1 med1 LOC107568266 LOC107568266 LOC107597566 LOC107597566 ENSSGRP00000076008 ENSSGRP00000076008 LOC107600467 LOC107600467 gtf2a1 gtf2a1 LOC107588615 LOC107588615 ENSSGRP00000068480 ENSSGRP00000068480 ENSSGRP00000062629 ENSSGRP00000062629 LOC107591795 LOC107591795 ENSSGRP00000056823 ENSSGRP00000056823 ENSSGRP00000055176 ENSSGRP00000055176 LOC107586044 LOC107586044 LOC107562553 LOC107562553 LOC107602008 LOC107602008 LOC107554941 LOC107554941 ENSSGRP00000092224 ENSSGRP00000092224 ENSSGRP00000094695 ENSSGRP00000094695 ENSSGRP00000095901 ENSSGRP00000095901 LOC107574261 LOC107574261 LOC107566933 LOC107566933 taf13 taf13
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107550511Transcription initiation factor TFIID subunit 10-like isoform X1. (189 aa)
LOC107571117Activated RNA polymerase II transcriptional coactivator p15-like. (151 aa)
ercc1DNA excision repair protein ERCC-1. (341 aa)
ENSSGRP00000105732DNA excision repair protein ERCC-1-like. (334 aa)
ENSSGRP00000107198PAX-interacting protein 1-like. (1125 aa)
LOC107552599Activated RNA polymerase II transcriptional coactivator p15-like. (125 aa)
ENSSGRP00000006671General transcription factor IIA, 1. (274 aa)
LOC10754954026S protease regulatory subunit 10B. (396 aa)
LOC107567477Homeobox protein Nkx-2.5-like. (309 aa)
LOC107598375Homeobox protein Nkx-2.5-like. (315 aa)
LOC107551382Serum response factor-like. (524 aa)
LOC107594597Transcription initiation factor TFIIA small subunit. (109 aa)
LOC10758210326S protease regulatory subunit 10B-like. (389 aa)
ENSSGRP00000089850annotation not available (238 aa)
taf6Transcription initiation factor TFIID subunit 6. (636 aa)
ENSSGRP00000018198Serum response factor-like. (238 aa)
ENSSGRP00000019538annotation not available (341 aa)
ENSSGRP00000023709annotation not available (432 aa)
LOC107588503Transcription initiation factor TFIID subunit 12-like. (162 aa)
ENSSGRP00000089852annotation not available (119 aa)
LOC107561045Transcription initiation factor TFIID subunit 4-like isoform X1. (851 aa)
med1Mediator of RNA polymerase II transcription subunit 1 isoform X1. (1776 aa)
LOC107568266Serum response factor-like isoform X1. (285 aa)
LOC107597566Mediator of RNA polymerase II transcription subunit 14-like. (1303 aa)
ENSSGRP00000076008PAX interacting (with transcription-activation domain) protein 1. (1141 aa)
LOC107600467Transcription initiation factor TFIID subunit 4-like. (178 aa)
gtf2a1Transcription initiation factor TFIIA large subunit. (373 aa)
LOC107588615DNA excision repair protein ERCC-6-like. (1395 aa)
ENSSGRP00000068480Mediator of RNA polymerase II transcription subunit 14-like. (1417 aa)
ENSSGRP00000062629annotation not available (350 aa)
LOC107591795Transcription initiation factor TFIID subunit 10-like. (188 aa)
ENSSGRP00000056823DEAH (Asp-Glu-Ala-His) box polypeptide 36. (855 aa)
ENSSGRP00000055176Serum response factor-like. (238 aa)
LOC107586044Transcription initiation factor TFIIA small subunit. (109 aa)
LOC107562553Activated RNA polymerase II transcriptional coactivator p15. (125 aa)
LOC107602008Activated RNA polymerase II transcriptional coactivator p15-like. (125 aa)
LOC107554941Transcription initiation factor TFIID subunit 4-like. (941 aa)
ENSSGRP00000092224TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (546 aa)
ENSSGRP00000094695Transcription initiation factor TFIID subunit 3-like. (844 aa)
ENSSGRP00000095901Transcription initiation factor TFIID subunit 4-like. (279 aa)
LOC107574261Transcription initiation factor TFIID subunit 4-like. (971 aa)
LOC107566933Transcription initiation factor TFIID subunit 12-like. (162 aa)
taf13Transcription initiation factor TFIID subunit 13. (124 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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