(23 nodes) Cartilage morphogenesis network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107548884	Activated leukocyte cell adhesion molecule. (564 aa)
	LOC107575291	Homeobox protein MSX-2-like. (224 aa)
	ENSSGRP00000066664	Muscle segment homeobox 1a. (150 aa)
	ENSSGRP00000054360	Cholinergic receptor, nicotinic, alpha 1 (muscle). (443 aa)
	LOC107572035	Wingless-type MMTV integration site family, member 5. (380 aa)
	LOC107553896	Wingless-type MMTV integration site family, member 5. (374 aa)
	LOC107554695	Zinc finger protein SNAI2-like. (257 aa)
	ENSSGRP00000108555	Cholinergic receptor, nicotinic, alpha 1 (muscle). (471 aa)
	ENSSGRP00000102415	LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like. (1037 aa)
	LOC107588193	Cytochrome P450 family 26 subfamily B. (511 aa)
	ENSSGRP00000010767	Activated leukocyte cell adhesion molecule. (635 aa)
	LOC107562039	Cytochrome P450 family 26 subfamily B. (511 aa)
	LOC107557907	Ras-related protein Rap-1A-like. (185 aa)
	LOC107599746	Zinc finger protein SNAI2-like. (257 aa)
	LOC107597537	Activated leukocyte cell adhesion molecule. (557 aa)
	LOC107556321	Ras-related protein Rap-1A-like. (185 aa)
	tbx1	T-box transcription factor TBX1 isoform X1. (519 aa)
	rap1b	RAP1B, member of RAS oncogene family. (185 aa)
	LOC107560426	Ras-related protein Rap-1A-like. (185 aa)
	ENSSGRP00000036904	T-box transcription factor 1. (434 aa)
	LOC107594522	Ras-related protein Rap-1A. (185 aa)
	ENSSGRP00000023653	Activated leukocyte cell adhesion molecule. (557 aa)
	ENSSGRP00000022723	Neural cell adhesion molecule L1.1-like. (1202 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000022723	ENSSGRP00000102415	ENSSGRP00000022723	ENSSGRP00000102415	Neural cell adhesion molecule L1.1-like.	LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like.	0.901
ENSSGRP00000036904	LOC107553896	ENSSGRP00000036904	ENSSGRP00000050175	T-box transcription factor 1.	Wingless-type MMTV integration site family, member 5.	0.424
ENSSGRP00000036904	LOC107572035	ENSSGRP00000036904	ENSSGRP00000050689	T-box transcription factor 1.	Wingless-type MMTV integration site family, member 5.	0.515
ENSSGRP00000066664	LOC107554695	ENSSGRP00000066664	ENSSGRP00000021938	Muscle segment homeobox 1a.	Zinc finger protein SNAI2-like.	0.557
ENSSGRP00000066664	LOC107599746	ENSSGRP00000066664	ENSSGRP00000094674	Muscle segment homeobox 1a.	Zinc finger protein SNAI2-like.	0.557
ENSSGRP00000102415	ENSSGRP00000022723	ENSSGRP00000102415	ENSSGRP00000022723	LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like.	Neural cell adhesion molecule L1.1-like.	0.901
LOC107553896	ENSSGRP00000036904	ENSSGRP00000050175	ENSSGRP00000036904	Wingless-type MMTV integration site family, member 5.	T-box transcription factor 1.	0.424
LOC107553896	LOC107572035	ENSSGRP00000050175	ENSSGRP00000050689	Wingless-type MMTV integration site family, member 5.	Wingless-type MMTV integration site family, member 5.	0.917
LOC107553896	tbx1	ENSSGRP00000050175	ENSSGRP00000097228	Wingless-type MMTV integration site family, member 5.	T-box transcription factor TBX1 isoform X1.	0.424
LOC107554695	ENSSGRP00000066664	ENSSGRP00000021938	ENSSGRP00000066664	Zinc finger protein SNAI2-like.	Muscle segment homeobox 1a.	0.557
LOC107554695	LOC107575291	ENSSGRP00000021938	ENSSGRP00000014659	Zinc finger protein SNAI2-like.	Homeobox protein MSX-2-like.	0.557
LOC107554695	LOC107599746	ENSSGRP00000021938	ENSSGRP00000094674	Zinc finger protein SNAI2-like.	Zinc finger protein SNAI2-like.	0.900
LOC107572035	ENSSGRP00000036904	ENSSGRP00000050689	ENSSGRP00000036904	Wingless-type MMTV integration site family, member 5.	T-box transcription factor 1.	0.515
LOC107572035	LOC107553896	ENSSGRP00000050689	ENSSGRP00000050175	Wingless-type MMTV integration site family, member 5.	Wingless-type MMTV integration site family, member 5.	0.917
LOC107572035	tbx1	ENSSGRP00000050689	ENSSGRP00000097228	Wingless-type MMTV integration site family, member 5.	T-box transcription factor TBX1 isoform X1.	0.515
LOC107575291	LOC107554695	ENSSGRP00000014659	ENSSGRP00000021938	Homeobox protein MSX-2-like.	Zinc finger protein SNAI2-like.	0.557
LOC107575291	LOC107599746	ENSSGRP00000014659	ENSSGRP00000094674	Homeobox protein MSX-2-like.	Zinc finger protein SNAI2-like.	0.557
LOC107599746	ENSSGRP00000066664	ENSSGRP00000094674	ENSSGRP00000066664	Zinc finger protein SNAI2-like.	Muscle segment homeobox 1a.	0.557
LOC107599746	LOC107554695	ENSSGRP00000094674	ENSSGRP00000021938	Zinc finger protein SNAI2-like.	Zinc finger protein SNAI2-like.	0.900
LOC107599746	LOC107575291	ENSSGRP00000094674	ENSSGRP00000014659	Zinc finger protein SNAI2-like.	Homeobox protein MSX-2-like.	0.557