(9 nodes) Hepatocyte differentiation network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000065826	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like. (411 aa)
	ENSSGRP00000080321	E2F transcription factor 8. (613 aa)
	LOC107591795	Transcription initiation factor TFIID subunit 10-like. (188 aa)
	LOC107550511	Transcription initiation factor TFIID subunit 10-like isoform X1. (189 aa)
	LOC107560258	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like isoform X1. (639 aa)
	ENSSGRP00000018094	Transcription factor E2F7-like. (478 aa)
	LOC107589937	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like. (665 aa)
	E2f7	Transcription factor E2F7/8. (695 aa)
	LOC107557282	Transcription factor E2F8-like isoform X1. (927 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E2f7	ENSSGRP00000080321	ENSSGRP00000111747	ENSSGRP00000080321	Transcription factor E2F7/8.	E2F transcription factor 8.	0.677
E2f7	LOC107557282	ENSSGRP00000111747	ENSSGRP00000079262	Transcription factor E2F7/8.	Transcription factor E2F8-like isoform X1.	0.673
ENSSGRP00000018094	ENSSGRP00000080321	ENSSGRP00000018094	ENSSGRP00000080321	Transcription factor E2F7-like.	E2F transcription factor 8.	0.668
ENSSGRP00000018094	LOC107557282	ENSSGRP00000018094	ENSSGRP00000079262	Transcription factor E2F7-like.	Transcription factor E2F8-like isoform X1.	0.660
ENSSGRP00000065826	LOC107560258	ENSSGRP00000065826	ENSSGRP00000021492	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like isoform X1.	0.903
ENSSGRP00000065826	LOC107589937	ENSSGRP00000065826	ENSSGRP00000109618	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	0.903
ENSSGRP00000080321	E2f7	ENSSGRP00000080321	ENSSGRP00000111747	E2F transcription factor 8.	Transcription factor E2F7/8.	0.677
ENSSGRP00000080321	ENSSGRP00000018094	ENSSGRP00000080321	ENSSGRP00000018094	E2F transcription factor 8.	Transcription factor E2F7-like.	0.668
LOC107550511	LOC107591795	ENSSGRP00000027160	ENSSGRP00000060228	Transcription initiation factor TFIID subunit 10-like isoform X1.	Transcription initiation factor TFIID subunit 10-like.	0.900
LOC107557282	E2f7	ENSSGRP00000079262	ENSSGRP00000111747	Transcription factor E2F8-like isoform X1.	Transcription factor E2F7/8.	0.673
LOC107557282	ENSSGRP00000018094	ENSSGRP00000079262	ENSSGRP00000018094	Transcription factor E2F8-like isoform X1.	Transcription factor E2F7-like.	0.660
LOC107560258	ENSSGRP00000065826	ENSSGRP00000021492	ENSSGRP00000065826	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like isoform X1.	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	0.903
LOC107560258	LOC107589937	ENSSGRP00000021492	ENSSGRP00000109618	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like isoform X1.	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	0.900
LOC107589937	ENSSGRP00000065826	ENSSGRP00000109618	ENSSGRP00000065826	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	0.903
LOC107589937	LOC107560258	ENSSGRP00000109618	ENSSGRP00000021492	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like.	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]-like isoform X1.	0.900
LOC107591795	LOC107550511	ENSSGRP00000060228	ENSSGRP00000027160	Transcription initiation factor TFIID subunit 10-like.	Transcription initiation factor TFIID subunit 10-like isoform X1.	0.900