(17 nodes) UV-damage excision repair network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000000773	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010. (530 aa)
	Actr5	Actin-related protein 5. (482 aa)
	LOC107562394	NAD-dependent protein deacetylase sirtuin-1-like. (642 aa)
	ENSSGRP00000034228	Polymerase (DNA-directed), delta 3, accessory subunit. (409 aa)
	ENSSGRP00000041925	Damage-specific DNA binding protein 1. (1117 aa)
	Mc1r	Melanocyte-stimulating hormone receptor. (294 aa)
	ENSSGRP00000060121	annotation not available (180 aa)
	ENSSGRP00000071666	INO80 complex ATPase subunit. (1364 aa)
	LOC107548157	DNA polymerase delta subunit 3-like isoform X1. (458 aa)
	ENSSGRP00000095199	Uncharacterized protein LOC107557956. (523 aa)
	ENSSGRP00000099779	DNA helicase INO80-like isoform X1. (1474 aa)
	LOC107565065	NAD-dependent protein deacetylase sirtuin-1-like isoform X1. (501 aa)
	ENSSGRP00000104985	annotation not available (146 aa)
	ercc1	DNA excision repair protein ERCC-1. (341 aa)
	ENSSGRP00000105732	DNA excision repair protein ERCC-1-like. (334 aa)
	xpc	DNA repair protein complementing XP-C cells isoform X1. (880 aa)
	ENSSGRP00000005593	annotation not available (240 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Actr5	ENSSGRP00000000773	ENSSGRP00000023767	ENSSGRP00000000773	Actin-related protein 5.	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	0.619
Actr5	ENSSGRP00000005593	ENSSGRP00000023767	ENSSGRP00000005593	Actin-related protein 5.	annotation not available	0.619
Actr5	ENSSGRP00000041925	ENSSGRP00000023767	ENSSGRP00000041925	Actin-related protein 5.	Damage-specific DNA binding protein 1.	0.795
Actr5	ENSSGRP00000071666	ENSSGRP00000023767	ENSSGRP00000071666	Actin-related protein 5.	INO80 complex ATPase subunit.	0.998
Actr5	ENSSGRP00000095199	ENSSGRP00000023767	ENSSGRP00000095199	Actin-related protein 5.	Uncharacterized protein LOC107557956.	0.619
Actr5	ENSSGRP00000099779	ENSSGRP00000023767	ENSSGRP00000099779	Actin-related protein 5.	DNA helicase INO80-like isoform X1.	0.998
ENSSGRP00000000773	Actr5	ENSSGRP00000000773	ENSSGRP00000023767	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	Actin-related protein 5.	0.619
ENSSGRP00000000773	ENSSGRP00000041925	ENSSGRP00000000773	ENSSGRP00000041925	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	Damage-specific DNA binding protein 1.	0.923
ENSSGRP00000000773	ENSSGRP00000060121	ENSSGRP00000000773	ENSSGRP00000060121	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	annotation not available	0.897
ENSSGRP00000000773	ENSSGRP00000071666	ENSSGRP00000000773	ENSSGRP00000071666	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	INO80 complex ATPase subunit.	0.542
ENSSGRP00000000773	ENSSGRP00000099779	ENSSGRP00000000773	ENSSGRP00000099779	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	DNA helicase INO80-like isoform X1.	0.542
ENSSGRP00000000773	ENSSGRP00000104985	ENSSGRP00000000773	ENSSGRP00000104985	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	annotation not available	0.419
ENSSGRP00000000773	ENSSGRP00000105732	ENSSGRP00000000773	ENSSGRP00000105732	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	DNA excision repair protein ERCC-1-like.	0.977
ENSSGRP00000000773	LOC107562394	ENSSGRP00000000773	ENSSGRP00000017436	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	NAD-dependent protein deacetylase sirtuin-1-like.	0.419
ENSSGRP00000000773	LOC107565065	ENSSGRP00000000773	ENSSGRP00000104983	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	NAD-dependent protein deacetylase sirtuin-1-like isoform X1.	0.419
ENSSGRP00000000773	ercc1	ENSSGRP00000000773	ENSSGRP00000105498	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	DNA excision repair protein ERCC-1.	0.977
ENSSGRP00000000773	xpc	ENSSGRP00000000773	ENSSGRP00000013983	LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.	DNA repair protein complementing XP-C cells isoform X1.	0.897
ENSSGRP00000005593	Actr5	ENSSGRP00000005593	ENSSGRP00000023767	annotation not available	Actin-related protein 5.	0.619
ENSSGRP00000005593	ENSSGRP00000041925	ENSSGRP00000005593	ENSSGRP00000041925	annotation not available	Damage-specific DNA binding protein 1.	0.923
ENSSGRP00000005593	ENSSGRP00000060121	ENSSGRP00000005593	ENSSGRP00000060121	annotation not available	annotation not available	0.897