(7 nodes) Error-free translesion synthesis network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000016326	DNA polymerase delta catalytic subunit-like. (831 aa)
	LOC107585571	Polymerase delta-interacting protein 2-like isoform X1. (377 aa)
	rev1	DNA repair protein REV1. (1277 aa)
	ENSSGRP00000017974	annotation not available (756 aa)
	pold1	DNA polymerase delta catalytic subunit. (1106 aa)
	LOC107592603	Polymerase delta-interacting protein 2-like isoform X1. (375 aa)
	ENSSGRP00000098764	DNA repair protein REV1-like. (1219 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000016326	ENSSGRP00000098764	ENSSGRP00000016326	ENSSGRP00000098764	DNA polymerase delta catalytic subunit-like.	DNA repair protein REV1-like.	0.865
ENSSGRP00000016326	pold1	ENSSGRP00000016326	ENSSGRP00000070896	DNA polymerase delta catalytic subunit-like.	DNA polymerase delta catalytic subunit.	0.901
ENSSGRP00000016326	rev1	ENSSGRP00000016326	ENSSGRP00000074596	DNA polymerase delta catalytic subunit-like.	DNA repair protein REV1.	0.865
ENSSGRP00000017974	ENSSGRP00000098764	ENSSGRP00000017974	ENSSGRP00000098764	annotation not available	DNA repair protein REV1-like.	0.865
ENSSGRP00000017974	rev1	ENSSGRP00000017974	ENSSGRP00000074596	annotation not available	DNA repair protein REV1.	0.865
ENSSGRP00000098764	ENSSGRP00000016326	ENSSGRP00000098764	ENSSGRP00000016326	DNA repair protein REV1-like.	DNA polymerase delta catalytic subunit-like.	0.865
ENSSGRP00000098764	ENSSGRP00000017974	ENSSGRP00000098764	ENSSGRP00000017974	DNA repair protein REV1-like.	annotation not available	0.865
ENSSGRP00000098764	LOC107585571	ENSSGRP00000098764	ENSSGRP00000082162	DNA repair protein REV1-like.	Polymerase delta-interacting protein 2-like isoform X1.	0.401
ENSSGRP00000098764	LOC107592603	ENSSGRP00000098764	ENSSGRP00000104452	DNA repair protein REV1-like.	Polymerase delta-interacting protein 2-like isoform X1.	0.401
ENSSGRP00000098764	pold1	ENSSGRP00000098764	ENSSGRP00000070896	DNA repair protein REV1-like.	DNA polymerase delta catalytic subunit.	0.865
ENSSGRP00000098764	rev1	ENSSGRP00000098764	ENSSGRP00000074596	DNA repair protein REV1-like.	DNA repair protein REV1.	0.900
LOC107585571	ENSSGRP00000098764	ENSSGRP00000082162	ENSSGRP00000098764	Polymerase delta-interacting protein 2-like isoform X1.	DNA repair protein REV1-like.	0.401
LOC107585571	rev1	ENSSGRP00000082162	ENSSGRP00000074596	Polymerase delta-interacting protein 2-like isoform X1.	DNA repair protein REV1.	0.401
LOC107592603	ENSSGRP00000098764	ENSSGRP00000104452	ENSSGRP00000098764	Polymerase delta-interacting protein 2-like isoform X1.	DNA repair protein REV1-like.	0.401
LOC107592603	rev1	ENSSGRP00000104452	ENSSGRP00000074596	Polymerase delta-interacting protein 2-like isoform X1.	DNA repair protein REV1.	0.401
pold1	ENSSGRP00000016326	ENSSGRP00000070896	ENSSGRP00000016326	DNA polymerase delta catalytic subunit.	DNA polymerase delta catalytic subunit-like.	0.901
pold1	ENSSGRP00000098764	ENSSGRP00000070896	ENSSGRP00000098764	DNA polymerase delta catalytic subunit.	DNA repair protein REV1-like.	0.865
pold1	rev1	ENSSGRP00000070896	ENSSGRP00000074596	DNA polymerase delta catalytic subunit.	DNA repair protein REV1.	0.865
rev1	ENSSGRP00000016326	ENSSGRP00000074596	ENSSGRP00000016326	DNA repair protein REV1.	DNA polymerase delta catalytic subunit-like.	0.865
rev1	ENSSGRP00000017974	ENSSGRP00000074596	ENSSGRP00000017974	DNA repair protein REV1.	annotation not available	0.865