STRINGSTRING
LOC107598186 LOC107598186 ENSSGRP00000000245 ENSSGRP00000000245 LOC107559132 LOC107559132 ENSSGRP00000001226 ENSSGRP00000001226 ENSSGRP00000001771 ENSSGRP00000001771 LOC107571110 LOC107571110 ENSSGRP00000003457 ENSSGRP00000003457 dhx34 dhx34 ppwd1 ppwd1 ENSSGRP00000005325 ENSSGRP00000005325 ENSSGRP00000005385 ENSSGRP00000005385 ENSSGRP00000006172 ENSSGRP00000006172 ENSSGRP00000006445 ENSSGRP00000006445 ENSSGRP00000006652 ENSSGRP00000006652 ENSSGRP00000007458 ENSSGRP00000007458 cdc40 cdc40 ENSSGRP00000013227 ENSSGRP00000013227 ENSSGRP00000016080 ENSSGRP00000016080 LOC107559756 LOC107559756 LOC107600898 LOC107600898 SF3B2 SF3B2 dhx8 dhx8 ENSSGRP00000020384 ENSSGRP00000020384 LOC107575440 LOC107575440 Cwc27 Cwc27 ENSSGRP00000021245 ENSSGRP00000021245 LSM3 LSM3 SART1 SART1 ENSSGRP00000023340 ENSSGRP00000023340 wdr83 wdr83 ENSSGRP00000024409 ENSSGRP00000024409 LOC107580725 LOC107580725 ENSSGRP00000025646 ENSSGRP00000025646 LOC107591625 LOC107591625 syf2 syf2 LOC107585897 LOC107585897 Snrpa1 Snrpa1 LOC107583602 LOC107583602 LOC107590066 LOC107590066 LOC107571276 LOC107571276 ENSSGRP00000031588 ENSSGRP00000031588 LOC107549138 LOC107549138 wdr25 wdr25 LOC107598637 LOC107598637 eftud2 eftud2 ENSSGRP00000036461 ENSSGRP00000036461 ENSSGRP00000037092 ENSSGRP00000037092 LOC107552258-2 LOC107552258-2 LOC107599886 LOC107599886 BCAS2 BCAS2 AQR AQR SF3A3 SF3A3 LOC107594056 LOC107594056 ENSSGRP00000041114 ENSSGRP00000041114 ENSSGRP00000044962 ENSSGRP00000044962 Syncrip Syncrip LOC107571494 LOC107571494 ENSSGRP00000045098 ENSSGRP00000045098 ENSSGRP00000046704 ENSSGRP00000046704 sf3b6 sf3b6 ENSSGRP00000048983 ENSSGRP00000048983 ENSSGRP00000049429 ENSSGRP00000049429 eif4a3 eif4a3 snrpb snrpb LOC107582929 LOC107582929 LOC107586931 LOC107586931 ENSSGRP00000052429 ENSSGRP00000052429 ENSSGRP00000052432 ENSSGRP00000052432 ENSSGRP00000052492 ENSSGRP00000052492 ppil3 ppil3 LOC107563155 LOC107563155 zcchc8 zcchc8 ENSSGRP00000054055 ENSSGRP00000054055 ENSSGRP00000054889 ENSSGRP00000054889 LOC107571532 LOC107571532 Rbmx Rbmx ppie ppie LOC107599446 LOC107599446 LOC107584443 LOC107584443 ess2 ess2 DDX41 DDX41 LOC107557038 LOC107557038 SNW1 SNW1 LOC107592276 LOC107592276 snrpd2 snrpd2 ENSSGRP00000062802 ENSSGRP00000062802 LOC107548576 LOC107548576 LOC107560625 LOC107560625 ppil1 ppil1 ENSSGRP00000065776 ENSSGRP00000065776 dhx38 dhx38 LOC107564850 LOC107564850 ENSSGRP00000067252 ENSSGRP00000067252 ENSSGRP00000069329 ENSSGRP00000069329 ENSSGRP00000069344 ENSSGRP00000069344 ENSSGRP00000069438 ENSSGRP00000069438 ENSSGRP00000074139 ENSSGRP00000074139 LOC107562728 LOC107562728 ENSSGRP00000075801 ENSSGRP00000075801 ddx23 ddx23 ENSSGRP00000076381 ENSSGRP00000076381 ppil2 ppil2 ENSSGRP00000077204 ENSSGRP00000077204 LOC107549270 LOC107549270 LOC107580725-2 LOC107580725-2 LOC107564998 LOC107564998 gpatch1 gpatch1 ENSSGRP00000080948 ENSSGRP00000080948 ENSSGRP00000082485 ENSSGRP00000082485 xab2 xab2 LOC107600046 LOC107600046 ENSSGRP00000086075 ENSSGRP00000086075 ENSSGRP00000086077 ENSSGRP00000086077 prpf19 prpf19 LOC107557830 LOC107557830 ENSSGRP00000087375 ENSSGRP00000087375 ENSSGRP00000087389 ENSSGRP00000087389 ENSSGRP00000087764 ENSSGRP00000087764 ENSSGRP00000089805 ENSSGRP00000089805 ENSSGRP00000089806 ENSSGRP00000089806 LOC107593559 LOC107593559 ENSSGRP00000091073 ENSSGRP00000091073 ENSSGRP00000092965 ENSSGRP00000092965 LOC107564451 LOC107564451 ENSSGRP00000095490 ENSSGRP00000095490 LOC107554722 LOC107554722 LOC107600046-2 LOC107600046-2 LOC107602857 LOC107602857 ENSSGRP00000099144 ENSSGRP00000099144 LOC107548810 LOC107548810 LOC107586617 LOC107586617 LOC107569635 LOC107569635 LOC107595847 LOC107595847 ENSSGRP00000108454 ENSSGRP00000108454 LOC107557460 LOC107557460 ENSSGRP00000108934 ENSSGRP00000108934 Dhx35 Dhx35 ENSSGRP00000109172 ENSSGRP00000109172 PRPF6 PRPF6 pold2 pold2 ENSSGRP00000112991 ENSSGRP00000112991
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107598186Serine/threonine-protein kinase PRP4 homolog. (1016 aa)
ENSSGRP00000000245Splicing factor 3a, subunit 2. (283 aa)
LOC107559132Crooked neck-like protein 1. (744 aa)
ENSSGRP00000001226U6 snRNA-associated Sm-like protein LSm3. (104 aa)
ENSSGRP00000001771Protein DGCR14-like. (290 aa)
LOC107571110Superkiller viralicidic activity 2-like 2 isoform X1. (1036 aa)
ENSSGRP00000003457Small nuclear ribonucleoprotein Sm D3. (147 aa)
dhx34Probable ATP-dependent RNA helicase DHX34 isoform X1. (1147 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (559 aa)
ENSSGRP00000005325annotation not available (375 aa)
ENSSGRP00000005385annotation not available (112 aa)
ENSSGRP00000006172annotation not available (122 aa)
ENSSGRP00000006445annotation not available (84 aa)
ENSSGRP00000006652annotation not available (68 aa)
ENSSGRP00000007458annotation not available (137 aa)
cdc40Cell division cycle 40. (502 aa)
ENSSGRP00000013227Cell division cycle 40 homolog (S. cerevisiae). (302 aa)
ENSSGRP00000016080Pre-mRNA-splicing factor SPF27-like. (140 aa)
LOC107559756Small nuclear ribonucleoprotein Sm D1-like. (120 aa)
LOC107600898Small nuclear ribonucleoprotein Sm D3-like. (128 aa)
SF3B2Splicing factor 3b subunit 2. (653 aa)
dhx8ATP-dependent RNA helicase DHX8/PRP22. (1200 aa)
ENSSGRP00000020384ISY1 splicing factor homolog. (222 aa)
LOC107575440Splicing factor 3A subunit 1-like. (536 aa)
Cwc27Peptidyl-prolyl cis-trans isomerase CWC27 homolog. (440 aa)
ENSSGRP00000021245Peptidylprolyl isomerase domain and WD repeat-containing protein 1-like. (622 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3. (102 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (773 aa)
ENSSGRP00000023340annotation not available (217 aa)
wdr83Mitogen-activated protein kinase organizer 1. (331 aa)
ENSSGRP00000024409Pleiotropic regulator 1-like. (529 aa)
LOC107580725Small nuclear ribonucleoprotein E isoform X1. (92 aa)
ENSSGRP00000025646Splicing factor 3b, subunit 2. (739 aa)
LOC107591625U5 small nuclear ribonucleoprotein 40 kDa protein-like. (346 aa)
syf2Pre-mRNA-splicing factor SYF2. (238 aa)
LOC107585897Protein mago nashi homolog. (147 aa)
Snrpa1U2 small nuclear ribonucleoprotein A. (98 aa)
LOC107583602Serine/arginine repetitive matrix protein 1-like isoform X1. (946 aa)
LOC107590066Pre-mRNA-splicing factor RBM22/SLT11. (424 aa)
LOC107571276Heterogeneous nuclear ribonucleoprotein R-like. (583 aa)
ENSSGRP00000031588Calphotin-like. (319 aa)
LOC107549138Protein mago nashi homolog. (147 aa)
wdr25WD repeat-containing protein 25. (215 aa)
LOC107598637Small nuclear ribonucleoprotein G. (76 aa)
eftud2116 kDa U5 small nuclear ribonucleoprotein component. (980 aa)
ENSSGRP00000036461annotation not available (145 aa)
ENSSGRP00000037092WD repeat domain containing 83. (300 aa)
LOC107552258-2U6 snRNA-associated Sm-like protein LSm2. (98 aa)
LOC107599886Serine/threonine-protein kinase PRP4 homolog isoform X1. (989 aa)
BCAS2Pre-mRNA-splicing factor SPF27. (229 aa)
AQRAquarius intron-binding spliceosomal factor. (1215 aa)
SF3A3Splicing factor 3A subunit 3-like. (477 aa)
LOC107594056Small nuclear ribonucleoprotein G-like isoform X1. (76 aa)
ENSSGRP00000041114XPA binding protein 2. (645 aa)
ENSSGRP00000044962annotation not available (71 aa)
SyncripHeterogeneous nuclear ribonucleoprotein Q. (208 aa)
LOC107571494Pre-mRNA-splicing factor RBM22/SLT11. (422 aa)
ENSSGRP00000045098Splicing factor 3a, subunit 3. (390 aa)
ENSSGRP00000046704BCAS2 pre-mRNA processing factor. (80 aa)
sf3b6Pre-mRNA branch site protein p14. (125 aa)
ENSSGRP00000048983Small nuclear ribonucleoprotein-associated protein B'-like. (219 aa)
ENSSGRP00000049429Peptidyl-prolyl cis-trans isomerase CWC27 homolog. (354 aa)
eif4a3Eukaryotic initiation factor 4A-III. (408 aa)
snrpbSmall nuclear ribonucleoprotein-associated proteins B and B. (247 aa)
LOC107582929Serine/arginine repetitive matrix protein 1-like isoform X1. (877 aa)
LOC107586931U6 snRNA-associated Sm-like protein LSm7. (103 aa)
ENSSGRP00000052429Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16. (937 aa)
ENSSGRP00000052432annotation not available (120 aa)
ENSSGRP00000052492Mtr4 exosome RNA helicase. (1014 aa)
ppil3Peptidyl-prolyl cis-trans isomerase-like 3. (161 aa)
LOC107563155Heterogeneous nuclear ribonucleoprotein Q isoform X1. (627 aa)
zcchc8Zinc finger CCHC domain-containing protein 8 isoform X1. (684 aa)
ENSSGRP00000054055Crooked neck pre-mRNA splicing factor 1. (752 aa)
ENSSGRP00000054889CWC22 spliceosome associated protein homolog. (940 aa)
LOC107571532Heterogeneous nuclear ribonucleoprotein R-like. (649 aa)
RbmxHeterogeneous nuclear ribonucleoprotein G. (386 aa)
ppiePeptidyl-prolyl isomerase E (cyclophilin E). (328 aa)
LOC107599446Heterogeneous nuclear ribonucleoprotein M-like isoform X1. (684 aa)
LOC107584443Peptidyl-prolyl cis-trans isomerase-like 1. (163 aa)
ess2Protein DGCR14. (472 aa)
DDX41DEAD-box helicase 41. (585 aa)
LOC107557038Serine/threonine-protein kinase PRP4 homolog. (985 aa)
SNW1SNW domain-containing protein 1. (548 aa)
LOC107592276Protein CWC15 homolog. (244 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2 isoform X1. (118 aa)
ENSSGRP00000062802annotation not available (45 aa)
LOC107548576Pre-mRNA-processing-splicing factor 8-like isoform X1. (2342 aa)
LOC107560625RNA-binding motif protein, X chromosome-like. (373 aa)
ppil1Peptidyl-prolyl cis-trans isomerase-like 1 isoform X1. (166 aa)
ENSSGRP00000065776annotation not available (105 aa)
dhx38Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16. (1252 aa)
LOC107564850LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8-like. (1072 aa)
ENSSGRP00000067252Elongation factor Tu GTP binding domain containing 2. (801 aa)
ENSSGRP00000069329Probable ATP-dependent RNA helicase DDX41. (494 aa)
ENSSGRP00000069344Pre-mRNA-splicing factor ISY1 homolog. (291 aa)
ENSSGRP00000069438Pleiotropic regulator 1-like. (503 aa)
ENSSGRP00000074139Pre-mRNA-splicing factor CWC22 homolog. (876 aa)
LOC107562728U6 snRNA-associated Sm-like protein LSm3. (102 aa)
ENSSGRP00000075801annotation not available (52 aa)
ddx23Probable ATP-dependent RNA helicase DDX23. (807 aa)
ENSSGRP00000076381Small nuclear ribonucleoprotein F-like isoform X1. (87 aa)
ppil2Peptidyl-prolyl cis-trans isomerase-like 2. (524 aa)
ENSSGRP00000077204LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (123 aa)
LOC107549270UPF0692 protein C19orf54 homolog isoform X1. (309 aa)
LOC107580725-2Small nuclear ribonucleoprotein E. (92 aa)
LOC107564998Heterogeneous nuclear ribonucleoprotein Q-like. (601 aa)
gpatch1G patch domain-containing protein 1. (1016 aa)
ENSSGRP00000080948pre-mRNA processing factor 8. (2322 aa)
ENSSGRP00000082485LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like. (2114 aa)
xab2Pre-mRNA-splicing factor SYF1 isoform X1. (871 aa)
LOC107600046Small nuclear ribonucleoprotein Sm D3-like. (127 aa)
ENSSGRP00000086075Probable ATP-dependent RNA helicase DDX23. (522 aa)
ENSSGRP00000086077annotation not available (171 aa)
prpf19Pre-mRNA-processing factor 19. (505 aa)
LOC107557830Small nuclear ribonucleoprotein Sm D2-like. (116 aa)
ENSSGRP00000087375Peptidylprolyl isomerase (cyclophilin)-like 2. (478 aa)
ENSSGRP00000087389Peptidyl-prolyl cis-trans isomerase-like 2. (62 aa)
ENSSGRP00000087764PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (795 aa)
ENSSGRP00000089805Heterogeneous nuclear ribonucleoprotein Q-like. (369 aa)
ENSSGRP00000089806annotation not available (55 aa)
LOC107593559U5 small nuclear ribonucleoprotein 40 kDa protein. (347 aa)
ENSSGRP00000091073SYF2 pre-mRNA-splicing factor. (222 aa)
ENSSGRP00000092965Pre-mRNA-splicing factor RBM22/SLT11. (381 aa)
LOC107564451Splicing factor 3A subunit 1-like. (784 aa)
ENSSGRP00000095490annotation not available (248 aa)
LOC107554722Serine/threonine-protein kinase PRP4 homolog. (1045 aa)
LOC107600046-2Small nuclear ribonucleoprotein Sm D3-like. (127 aa)
LOC107602857U5 small nuclear ribonucleoprotein 200 kDa helicase. (2134 aa)
ENSSGRP00000099144Uncharacterized protein LOC107562890 isoform X1. (207 aa)
LOC107548810Small nuclear ribonucleoprotein F. (86 aa)
LOC107586617Pinin-like. (671 aa)
LOC107569635Splicing factor 3B subunit 1 isoform X1. (1309 aa)
LOC107595847Splicing factor 3B subunit 1-like isoform X1. (1311 aa)
ENSSGRP00000108454Heterogeneous nuclear ribonucleoprotein M. (686 aa)
LOC107557460Small nuclear ribonucleoprotein Sm D1. (112 aa)
ENSSGRP00000108934SNW domain containing 1. (489 aa)
Dhx35Probable ATP-dependent RNA helicase DHX35. (590 aa)
ENSSGRP00000109172Peptidylprolyl isomerase (cyclophilin)-like 3. (121 aa)
PRPF6Pre-mRNA-processing factor 6 isoform X1. (1014 aa)
pold2Splicing factor 3A subunit 1-like. (787 aa)
ENSSGRP00000112991Pre-mRNA-processing factor 19-like. (424 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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