(70 nodes) Positive regulation of peptide hormone secretion network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000012259	Aminoacyl tRNA synthetase complex interacting multifunctional protein 1b. (346 aa)
	ENSSGRP00000012034	annotation not available (179 aa)
	LOC107578827	Free fatty acid receptor 2-like. (256 aa)
	ENSSGRP00000005580	Homeobox protein HTR-A2-like. (158 aa)
	ENSSGRP00000005120	annotation not available (203 aa)
	ENSSGRP00000004829	Calpain-10-like. (246 aa)
	ENSSGRP00000003798	Transmembrane 7 superfamily member 3-like isoform X1. (562 aa)
	ENSSGRP00000002471	26S proteasome non-ATPase regulatory subunit 9-like. (126 aa)
	aacs	Acetoacetyl-CoA synthetase. (720 aa)
	ENSSGRP00000069595	Mitochondrial pyruvate carrier 2-like. (116 aa)
	LOC107565401	Pro-thyrotropin-releasing hormone-like. (193 aa)
	ENSSGRP00000076161	Si:dkey-206f10.1. (1180 aa)
	ENSSGRP00000076285	Sirtuin 6. (350 aa)
	LOC107583817	Bile acid receptor-like. (345 aa)
	LOC107557810	Adenylate cyclase type 8-like isoform X1. (1217 aa)
	ENSSGRP00000083482	annotation not available (178 aa)
	ENSSGRP00000083484	Immunoglobulin-like domain-containing receptor 1. (350 aa)
	mpc2	Mitochondrial pyruvate carrier 2. (127 aa)
	LOC107564337	Fibrinogen beta chain-like isoform X1. (487 aa)
	LOC107562077	Bcl2-associated agonist of cell death-like. (152 aa)
	LOC107551732	Sorcin-like. (189 aa)
	LOC107596329	Sorcin-like isoform X1. (227 aa)
	ENSSGRP00000091295	Calpain-10-like. (583 aa)
	ENSSGRP00000092902	Pancreatic and duodenal homeobox 1. (248 aa)
	ENSSGRP00000094018	Urotensin 1. (140 aa)
	ENSSGRP00000095733	Nuclear receptor subfamily 0 group B member 2-like. (235 aa)
	ENSSGRP00000098384	LOW QUALITY PROTEIN: UI-like. (145 aa)
	LOC107588192	Bcl2-associated agonist of cell death-like. (153 aa)
	LOC107564525	Calcium uniporter protein, mitochondrial. (378 aa)
	LOC107548739	Pro-thyrotropin-releasing hormone-like. (172 aa)
	ENSSGRP00000099869	85/88 kDa calcium-independent phospholipase A2-like. (819 aa)
	ENSSGRP00000099876	85/88 kDa calcium-independent phospholipase A2-like. (159 aa)
	ENSSGRP00000101525	NAD-dependent protein deacetylase sirtuin-6-like. (362 aa)
	ENSSGRP00000102630	Ghrelin. (109 aa)
	ENSSGRP00000102736	Bcl2-associated agonist of cell death-like. (115 aa)
	LOC107594777	Adenylate cyclase type 8-like isoform X1. (1180 aa)
	LOC107564279	Mitochondrial pyruvate carrier 2-like. (144 aa)
	ENSSGRP00000016167	Si:ch211-132f19.7. (1139 aa)
	LOC107587343	C2 domain-containing protein 2-like isoform X1. (709 aa)
	LOC107569488	Adenylate cyclase type 8-like isoform X1. (1220 aa)
	ENSSGRP00000013267	annotation not available (99 aa)
	LOC107594432	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like isoform X1. (324 aa)
	LOC107586798	Corticotropin-releasing hormone. (162 aa)
	ENSSGRP00000107834	Acetoacetyl-CoA synthetase-like. (554 aa)
	ENSSGRP00000109418	Free fatty acid receptor 3-like. (290 aa)
	LOC107590509	Transmembrane 7 superfamily member 3-like isoform X1. (569 aa)
	LOC107551352	Calcium uniporter protein, mitochondrial-like. (378 aa)
	ENSSGRP00000041684	Fibrinogen beta chain. (249 aa)
	LOC107566996	Corticotropin-releasing hormone. (138 aa)
	LOC107556696	Rab effector MyRIP-like isoform X1. (1090 aa)
	ENSSGRP00000044854	Bile acid receptor-like isoform X1. (479 aa)
	ENSSGRP00000046849	Pancreatic and duodenal homeobox 1. (189 aa)
	ENSSGRP00000053252	Corticotropin-releasing hormone. (122 aa)
	LOC107602675	85/88 kDa calcium-independent phospholipase A2-like. (819 aa)
	nr1h4	Farnesoid X receptor. (483 aa)
	LOC107549698	Adenylate cyclase type 8-like isoform X1. (1183 aa)
	psmd9	26S proteasome non-ATPase regulatory subunit 9 isoform X1. (210 aa)
	Rfx6	DNA-binding protein RFX6. (835 aa)
	LOC107590339	Corticotropin-releasing hormone. (162 aa)
	ENSSGRP00000066752	Rab effector MyRIP-like isoform X1. (1235 aa)
	LOC107570978	Bile acid receptor-like isoform X1. (482 aa)
	ENSSGRP00000035838	Mitochondrial pyruvate carrier 2-like. (82 aa)
	LOC107581690	Sorcin-like isoform X1. (189 aa)
	LOC107582823	Ghrelin-like. (101 aa)
	ENSSGRP00000032214	Nuclear receptor subfamily 0 group B member 2-like. (254 aa)
	LOC107597552	C2 domain-containing protein 2-like isoform X1. (706 aa)
	aimp1	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1. (319 aa)
	LOC107561312	Tumor necrosis factor ligand superfamily member 11-like. (260 aa)
	ENSSGRP00000018936	annotation not available (562 aa)
	LOC107570078	Immunoglobulin-like domain-containing receptor 1. (472 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002471	psmd9	ENSSGRP00000002471	ENSSGRP00000063329	26S proteasome non-ATPase regulatory subunit 9-like.	26S proteasome non-ATPase regulatory subunit 9 isoform X1.	0.901
ENSSGRP00000004829	LOC107551732	ENSSGRP00000004829	ENSSGRP00000088252	Calpain-10-like.	Sorcin-like.	0.430
ENSSGRP00000004829	LOC107581690	ENSSGRP00000004829	ENSSGRP00000034622	Calpain-10-like.	Sorcin-like isoform X1.	0.430
ENSSGRP00000004829	LOC107596329	ENSSGRP00000004829	ENSSGRP00000090175	Calpain-10-like.	Sorcin-like isoform X1.	0.430
ENSSGRP00000012034	ENSSGRP00000044854	ENSSGRP00000012034	ENSSGRP00000044854	annotation not available	Bile acid receptor-like isoform X1.	0.612
ENSSGRP00000012034	LOC107570978	ENSSGRP00000012034	ENSSGRP00000038693	annotation not available	Bile acid receptor-like isoform X1.	0.612
ENSSGRP00000012034	LOC107583817	ENSSGRP00000012034	ENSSGRP00000076483	annotation not available	Bile acid receptor-like.	0.612
ENSSGRP00000012034	nr1h4	ENSSGRP00000012034	ENSSGRP00000058780	annotation not available	Farnesoid X receptor.	0.612
ENSSGRP00000032214	ENSSGRP00000044854	ENSSGRP00000032214	ENSSGRP00000044854	Nuclear receptor subfamily 0 group B member 2-like.	Bile acid receptor-like isoform X1.	0.612
ENSSGRP00000032214	LOC107570978	ENSSGRP00000032214	ENSSGRP00000038693	Nuclear receptor subfamily 0 group B member 2-like.	Bile acid receptor-like isoform X1.	0.612
ENSSGRP00000032214	LOC107583817	ENSSGRP00000032214	ENSSGRP00000076483	Nuclear receptor subfamily 0 group B member 2-like.	Bile acid receptor-like.	0.612
ENSSGRP00000032214	nr1h4	ENSSGRP00000032214	ENSSGRP00000058780	Nuclear receptor subfamily 0 group B member 2-like.	Farnesoid X receptor.	0.612
ENSSGRP00000044854	ENSSGRP00000012034	ENSSGRP00000044854	ENSSGRP00000012034	Bile acid receptor-like isoform X1.	annotation not available	0.612
ENSSGRP00000044854	ENSSGRP00000032214	ENSSGRP00000044854	ENSSGRP00000032214	Bile acid receptor-like isoform X1.	Nuclear receptor subfamily 0 group B member 2-like.	0.612
ENSSGRP00000044854	ENSSGRP00000095733	ENSSGRP00000044854	ENSSGRP00000095733	Bile acid receptor-like isoform X1.	Nuclear receptor subfamily 0 group B member 2-like.	0.612
ENSSGRP00000053252	ENSSGRP00000102630	ENSSGRP00000053252	ENSSGRP00000102630	Corticotropin-releasing hormone.	Ghrelin.	0.542
ENSSGRP00000053252	LOC107548739	ENSSGRP00000053252	ENSSGRP00000099242	Corticotropin-releasing hormone.	Pro-thyrotropin-releasing hormone-like.	0.524
ENSSGRP00000053252	LOC107565401	ENSSGRP00000053252	ENSSGRP00000070544	Corticotropin-releasing hormone.	Pro-thyrotropin-releasing hormone-like.	0.524
ENSSGRP00000053252	LOC107582823	ENSSGRP00000053252	ENSSGRP00000033308	Corticotropin-releasing hormone.	Ghrelin-like.	0.542
ENSSGRP00000091295	LOC107551732	ENSSGRP00000091295	ENSSGRP00000088252	Calpain-10-like.	Sorcin-like.	0.430