(32 nodes) Renal filtration network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000108842	Probable Xaa-Pro aminopeptidase 3. (512 aa)
	ENSSGRP00000106475	Extracellular sulfatase Sulf-2-like. (740 aa)
	ENSSGRP00000104834	Aquaporin 1a (Colton blood group), tandem duplicate 1. (249 aa)
	LOC107592060	Catenin beta-1-like. (785 aa)
	ENSSGRP00000085493	Si:ch211-286o17.1. (246 aa)
	LOC107557321	Integrin alpha-3-like. (914 aa)
	sulf1	Extracellular sulfatase Sulf-1 isoform X1. (1135 aa)
	ENSSGRP00000074011	Extracellular sulfatase Sulf-2-like. (864 aa)
	ENSSGRP00000072798	Sulfatase 2b. (689 aa)
	ENSSGRP00000070273	Si:ch211-286o17.1. (276 aa)
	ENSSGRP00000069199	LOW QUALITY PROTEIN: extracellular sulfatase Sulf-2-like. (875 aa)
	itga3	Integrin alpha 3. (999 aa)
	ENSSGRP00000067405	Catenin beta-1-like. (822 aa)
	LOC107601250	Integrin alpha-3-like isoform X1. (1058 aa)
	LOC107550651	Endothelin-1 receptor-like isoform X1. (422 aa)
	ENSSGRP00000062578	TBC1 domain family member 8B. (925 aa)
	ENSSGRP00000061257	Endothelin receptor type Ab. (353 aa)
	LOC107570993	Catenin beta-1 isoform X1. (791 aa)
	ENSSGRP00000047423	Transmembrane protein 63C. (707 aa)
	TMEM63C	Transmembrane protein 63C. (813 aa)
	ENSSGRP00000040319	Thrombospondin, type I, domain containing 7Aa. (1600 aa)
	ENSSGRP00000040066	annotation not available (1581 aa)
	ENSSGRP00000038634	Endothelin receptor type Ab. (341 aa)
	LOC107583262	Probable Xaa-Pro aminopeptidase 3 isoform X1. (510 aa)
	tbc1d8b	TBC1 domain family member 8/9. (1150 aa)
	LOC107567876	Aquaporin-1-like. (260 aa)
	LOC107567874	Aquaporin-1-like. (269 aa)
	LOC107598731	Endothelin receptor type A. (422 aa)
	ctnnb1	Catenin beta 1. (785 aa)
	ENSSGRP00000009221	Aquaporin-1-like. (279 aa)
	ENSSGRP00000003188	Sulfatase 1. (1069 aa)
	ENSSGRP00000108829	Integrin, alpha 3a. (835 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000067405	LOC107570993	ENSSGRP00000067405	ENSSGRP00000047498	Catenin beta-1-like.	Catenin beta-1 isoform X1.	0.900
ENSSGRP00000067405	LOC107592060	ENSSGRP00000067405	ENSSGRP00000099877	Catenin beta-1-like.	Catenin beta-1-like.	0.908
ENSSGRP00000067405	ctnnb1	ENSSGRP00000067405	ENSSGRP00000010620	Catenin beta-1-like.	Catenin beta 1.	0.908
LOC107550651	LOC107598731	ENSSGRP00000062849	ENSSGRP00000013953	Endothelin-1 receptor-like isoform X1.	Endothelin receptor type A.	0.900
LOC107557321	LOC107601250	ENSSGRP00000083902	ENSSGRP00000064724	Integrin alpha-3-like.	Integrin alpha-3-like isoform X1.	0.903
LOC107557321	itga3	ENSSGRP00000083902	ENSSGRP00000069086	Integrin alpha-3-like.	Integrin alpha 3.	0.901
LOC107570993	ENSSGRP00000067405	ENSSGRP00000047498	ENSSGRP00000067405	Catenin beta-1 isoform X1.	Catenin beta-1-like.	0.900
LOC107570993	LOC107592060	ENSSGRP00000047498	ENSSGRP00000099877	Catenin beta-1 isoform X1.	Catenin beta-1-like.	0.907
LOC107570993	ctnnb1	ENSSGRP00000047498	ENSSGRP00000010620	Catenin beta-1 isoform X1.	Catenin beta 1.	0.907
LOC107592060	ENSSGRP00000067405	ENSSGRP00000099877	ENSSGRP00000067405	Catenin beta-1-like.	Catenin beta-1-like.	0.908
LOC107592060	LOC107570993	ENSSGRP00000099877	ENSSGRP00000047498	Catenin beta-1-like.	Catenin beta-1 isoform X1.	0.907
LOC107592060	ctnnb1	ENSSGRP00000099877	ENSSGRP00000010620	Catenin beta-1-like.	Catenin beta 1.	0.900
LOC107598731	LOC107550651	ENSSGRP00000013953	ENSSGRP00000062849	Endothelin receptor type A.	Endothelin-1 receptor-like isoform X1.	0.900
LOC107601250	LOC107557321	ENSSGRP00000064724	ENSSGRP00000083902	Integrin alpha-3-like isoform X1.	Integrin alpha-3-like.	0.903
LOC107601250	itga3	ENSSGRP00000064724	ENSSGRP00000069086	Integrin alpha-3-like isoform X1.	Integrin alpha 3.	0.903
ctnnb1	ENSSGRP00000067405	ENSSGRP00000010620	ENSSGRP00000067405	Catenin beta 1.	Catenin beta-1-like.	0.908
ctnnb1	LOC107570993	ENSSGRP00000010620	ENSSGRP00000047498	Catenin beta 1.	Catenin beta-1 isoform X1.	0.907
ctnnb1	LOC107592060	ENSSGRP00000010620	ENSSGRP00000099877	Catenin beta 1.	Catenin beta-1-like.	0.900
itga3	LOC107557321	ENSSGRP00000069086	ENSSGRP00000083902	Integrin alpha 3.	Integrin alpha-3-like.	0.901
itga3	LOC107601250	ENSSGRP00000069086	ENSSGRP00000064724	Integrin alpha 3.	Integrin alpha-3-like isoform X1.	0.903