(8 nodes) R2TP complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIH1D2	PIH1 domain-containing protein 2-like isoform X1. (322 aa)
	ENSSGRP00000018702	RuvB-like protein 2. (496 aa)
	LOC107597476	ruvB-like 2. (464 aa)
	LOC107584430	RuvB-like protein 1 (pontin 52). (456 aa)
	LOC107568195	RuvB-like protein 1 (pontin 52). (456 aa)
	ENSSGRP00000085399	PIH1 domain-containing protein 2-like. (297 aa)
	LOC107583023	PIH1 domain-containing protein 1 isoform X1. (303 aa)
	LOC107548339	PIH1 domain-containing protein 1-like isoform X1. (299 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000018702	ENSSGRP00000085399	ENSSGRP00000018702	ENSSGRP00000085399	RuvB-like protein 2.	PIH1 domain-containing protein 2-like.	0.926
ENSSGRP00000018702	LOC107548339	ENSSGRP00000018702	ENSSGRP00000000673	RuvB-like protein 2.	PIH1 domain-containing protein 1-like isoform X1.	0.964
ENSSGRP00000018702	LOC107568195	ENSSGRP00000018702	ENSSGRP00000061304	RuvB-like protein 2.	RuvB-like protein 1 (pontin 52).	0.999
ENSSGRP00000018702	LOC107583023	ENSSGRP00000018702	ENSSGRP00000111889	RuvB-like protein 2.	PIH1 domain-containing protein 1 isoform X1.	0.964
ENSSGRP00000018702	LOC107584430	ENSSGRP00000018702	ENSSGRP00000058673	RuvB-like protein 2.	RuvB-like protein 1 (pontin 52).	0.999
ENSSGRP00000018702	PIH1D2	ENSSGRP00000018702	ENSSGRP00000004932	RuvB-like protein 2.	PIH1 domain-containing protein 2-like isoform X1.	0.926
ENSSGRP00000085399	ENSSGRP00000018702	ENSSGRP00000085399	ENSSGRP00000018702	PIH1 domain-containing protein 2-like.	RuvB-like protein 2.	0.926
ENSSGRP00000085399	LOC107548339	ENSSGRP00000085399	ENSSGRP00000000673	PIH1 domain-containing protein 2-like.	PIH1 domain-containing protein 1-like isoform X1.	0.610
ENSSGRP00000085399	LOC107568195	ENSSGRP00000085399	ENSSGRP00000061304	PIH1 domain-containing protein 2-like.	RuvB-like protein 1 (pontin 52).	0.934
ENSSGRP00000085399	LOC107583023	ENSSGRP00000085399	ENSSGRP00000111889	PIH1 domain-containing protein 2-like.	PIH1 domain-containing protein 1 isoform X1.	0.610
ENSSGRP00000085399	LOC107584430	ENSSGRP00000085399	ENSSGRP00000058673	PIH1 domain-containing protein 2-like.	RuvB-like protein 1 (pontin 52).	0.934
ENSSGRP00000085399	LOC107597476	ENSSGRP00000085399	ENSSGRP00000026572	PIH1 domain-containing protein 2-like.	ruvB-like 2.	0.926
LOC107548339	ENSSGRP00000018702	ENSSGRP00000000673	ENSSGRP00000018702	PIH1 domain-containing protein 1-like isoform X1.	RuvB-like protein 2.	0.964
LOC107548339	ENSSGRP00000085399	ENSSGRP00000000673	ENSSGRP00000085399	PIH1 domain-containing protein 1-like isoform X1.	PIH1 domain-containing protein 2-like.	0.610
LOC107548339	LOC107568195	ENSSGRP00000000673	ENSSGRP00000061304	PIH1 domain-containing protein 1-like isoform X1.	RuvB-like protein 1 (pontin 52).	0.965
LOC107548339	LOC107584430	ENSSGRP00000000673	ENSSGRP00000058673	PIH1 domain-containing protein 1-like isoform X1.	RuvB-like protein 1 (pontin 52).	0.965
LOC107548339	LOC107597476	ENSSGRP00000000673	ENSSGRP00000026572	PIH1 domain-containing protein 1-like isoform X1.	ruvB-like 2.	0.964
LOC107548339	PIH1D2	ENSSGRP00000000673	ENSSGRP00000004932	PIH1 domain-containing protein 1-like isoform X1.	PIH1 domain-containing protein 2-like isoform X1.	0.610
LOC107568195	ENSSGRP00000018702	ENSSGRP00000061304	ENSSGRP00000018702	RuvB-like protein 1 (pontin 52).	RuvB-like protein 2.	0.999
LOC107568195	ENSSGRP00000085399	ENSSGRP00000061304	ENSSGRP00000085399	RuvB-like protein 1 (pontin 52).	PIH1 domain-containing protein 2-like.	0.934