(116 nodes) Small ribosomal subunit network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107597883	28S ribosomal protein S33, mitochondrial-like. (106 aa)
	LOC107560721	28S ribosomal protein S33, mitochondrial-like. (106 aa)
	LOC107582565	28S ribosomal protein S26, mitochondrial-like. (208 aa)
	LOC107553320	28S ribosomal protein S5, mitochondrial-like. (397 aa)
	LOC107583531	28S ribosomal protein S5, mitochondrial-like. (397 aa)
	ENSSGRP00000002289	Small subunit ribosomal protein S3Ae. (111 aa)
	LOC107584687	28S ribosomal protein S2, mitochondrial-like. (264 aa)
	Ppp1r26	Protein phosphatase 1 regulatory subunit 26. (1196 aa)
	LOC107567735	Ubiquitin-small subunit ribosomal protein S27Ae. (156 aa)
	FAU	Small subunit ribosomal protein S30e. (133 aa)
	MRPS24	28S ribosomal protein S24, mitochondrial-like. (163 aa)
	rps29	Small subunit ribosomal protein S29e. (56 aa)
	ENSSGRP00000003292	ATP-dependent RNA helicase DHX29-like. (1224 aa)
	ENSSGRP00000003561	FAU ubiquitin like and ribosomal protein S30 fusion b. (153 aa)
	LOC107560721-2	28S ribosomal protein S33, mitochondrial-like. (106 aa)
	RPS15	Ribosomal protein S15. (133 aa)
	ENSSGRP00000004833	annotation not available (161 aa)
	LOC107579695	40S ribosomal protein S20-like. (64 aa)
	ENSSGRP00000006085	annotation not available (108 aa)
	ENSSGRP00000006135	28S ribosomal protein S7, mitochondrial-like. (125 aa)
	ENSSGRP00000006447	annotation not available (134 aa)
	ENSSGRP00000006676	Small subunit ribosomal protein S19e. (69 aa)
	LOC107585809	40S ribosomal protein S5. (220 aa)
	LOC107572144	Protein FAM126B-like isoform X1. (570 aa)
	ENSSGRP00000007466	Small subunit ribosomal protein SAe. (262 aa)
	ENSSGRP00000007473	annotation not available (46 aa)
	ENSSGRP00000007523	annotation not available (46 aa)
	ENSSGRP00000008080	annotation not available (82 aa)
	LOC107559191	Small subunit ribosomal protein S5e. (204 aa)
	ENSSGRP00000009624	annotation not available (195 aa)
	mrps25	28S ribosomal protein S25, mitochondrial. (173 aa)
	ENSSGRP00000010538	annotation not available (122 aa)
	ENSSGRP00000011182	annotation not available (59 aa)
	ENSSGRP00000011646	annotation not available (350 aa)
	RPS23	Ribosomal protein S23. (133 aa)
	RPS19	Small subunit ribosomal protein S19e. (86 aa)
	ENSSGRP00000016306	Ribosomal protein S17. (124 aa)
	LOC107598791	28S ribosomal protein S22, mitochondrial-like. (335 aa)
	LOC107576759	Small subunit ribosomal protein S18b, mitochondrial. (245 aa)
	ENSSGRP00000018465	annotation not available (82 aa)
	ENSSGRP00000018842	annotation not available (118 aa)
	ENSSGRP00000018931	annotation not available (130 aa)
	ENSSGRP00000019485	annotation not available (904 aa)
	ENSSGRP00000019849	Ribosomal protein SA. (254 aa)
	rps15	Small subunit ribosomal protein S15e. (148 aa)
	ENSSGRP00000021490	28S ribosomal protein S15, mitochondrial-like. (242 aa)
	LOC107575615	28S ribosomal protein S6, mitochondrial-like. (119 aa)
	LOC107557416	40S ribosomal protein S23. (182 aa)
	ENSSGRP00000025079	Small subunit ribosomal protein S3Ae. (104 aa)
	ENSSGRP00000025080	annotation not available (99 aa)
	LOC107560304	Small subunit ribosomal protein S16e. (146 aa)
	mrps27	28S ribosomal protein S27, mitochondrial. (392 aa)
	ENSSGRP00000035280	Small subunit ribosomal protein S18b, mitochondrial. (260 aa)
	LOC107567395	Small subunit ribosomal protein S30e. (133 aa)
	LOC107586033	Small subunit ribosomal protein S13e. (151 aa)
	Mrps10	28S ribosomal protein S10, mitochondrial. (166 aa)
	ENSSGRP00000041111	Mitochondrial ribosomal protein S6. (117 aa)
	mrps35	28S ribosomal protein S35, mitochondrial. (299 aa)
	LOC107559921	28S ribosomal protein S9, mitochondrial-like. (386 aa)
	LOC107603014	Small subunit ribosomal protein S6e. (249 aa)
	LOC107583381	Small subunit ribosomal protein S25e. (124 aa)
	LOC107563590	28S ribosomal protein S14, mitochondrial-like. (138 aa)
	ENSSGRP00000050425	annotation not available (108 aa)
	LOC107561487	Malignant T-cell-amplified sequence 1-like. (181 aa)
	ENSSGRP00000050887	Mitochondrial ribosomal protein S7. (212 aa)
	ENSSGRP00000050889	Mitochondrial ribosomal protein S7. (119 aa)
	LOC107565279	Small subunit ribosomal protein S25e. (124 aa)
	ENSSGRP00000052061	DEAH (Asp-Glu-Ala-His) box polypeptide 29. (1040 aa)
	rps3a	Small subunit ribosomal protein S3Ae. (148 aa)
	LOC107549111	Small subunit ribosomal protein S7e. (217 aa)
	LOC107599587	28S ribosomal protein S21, mitochondrial-like. (87 aa)
	LOC107599943	28S ribosomal protein S31, mitochondrial-like. (426 aa)
	LOC107583605	Small subunit ribosomal protein S2e. (279 aa)
	ENSSGRP00000059789	annotation not available (122 aa)
	LOC107593403	Small subunit ribosomal protein S13e. (151 aa)
	LOC107555664	40S ribosomal protein S2 isoform X1. (279 aa)
	LOC107563646	Small subunit ribosomal protein S26e. (115 aa)
	ENSSGRP00000063967	Mitochondrial ribosomal protein S2. (218 aa)
	LOC107559053	28S ribosomal protein S14, mitochondrial-like. (138 aa)
	ENSSGRP00000066612	Mitochondrial ribosomal protein S15. (246 aa)
	LOC107581188	28S ribosomal protein S18a, mitochondrial-like. (189 aa)
	RPS20	Small subunit ribosomal protein S20e. (120 aa)
	LOC107567169	28S ribosomal protein S12, mitochondrial-like. (143 aa)
	rps24	Small subunit ribosomal protein S24e. (152 aa)
	LOC107588630	Paladin-like. (864 aa)
	ENSSGRP00000073371	28S ribosomal protein S11, mitochondrial-like. (180 aa)
	ENSSGRP00000073376	28S ribosomal protein S11, mitochondrial-like. (185 aa)
	ENSSGRP00000073710	Small subunit ribosomal protein S17e. (186 aa)
	LOC107554515	28S ribosomal protein S24, mitochondrial-like. (154 aa)
	ENSSGRP00000074189	Mitochondrial ribosomal protein S31. (400 aa)
	LOC107555153	Small subunit ribosomal protein S30e. (133 aa)
	LOC107596838	Small subunit ribosomal protein S26e. (115 aa)
	LOC107559438	Small subunit ribosomal protein S17e. (135 aa)
	LOC107550595	Small subunit ribosomal protein S28e. (69 aa)
	LOC107551827	40S ribosomal protein S6. (252 aa)
	mrps16	28S ribosomal protein S16, mitochondrial. (135 aa)
	ENSSGRP00000079140	Paladin-like. (818 aa)
	rps19	Small subunit ribosomal protein S19e. (156 aa)
	LOC107567266	28S ribosomal protein S22, mitochondrial-like isoform X1. (335 aa)
	ENSSGRP00000080452	28S ribosomal protein S11, mitochondrial-like. (181 aa)
	LOC107567735-2	ubiquitin-40S ribosomal protein S27a. (156 aa)
	LOC107560304-2	40S ribosomal protein S16. (146 aa)
	rps11	Ribosomal protein S11. (170 aa)
	mrps18c	28S ribosomal protein S18c, mitochondrial. (135 aa)
	LOC107550595-2	40S ribosomal protein S28. (69 aa)
	LOC107554198	Small subunit ribosomal protein S26e. (115 aa)
	ENSSGRP00000092413	Mitochondrial ribosomal protein S9. (338 aa)
	LOC107581941	28S ribosomal protein S17, mitochondrial-like. (138 aa)
	LOC107583989	28S ribosomal protein S18a, mitochondrial-like. (205 aa)
	ENSSGRP00000097726	Small subunit ribosomal protein SAe. (345 aa)
	ENSSGRP00000099532	Small subunit ribosomal protein S28e. (87 aa)
	RPS11	Small subunit ribosomal protein S11e. (179 aa)
	LOC107557416-2	Small subunit ribosomal protein S23e. (198 aa)
	LOC107587217	28S ribosomal protein S17, mitochondrial-like. (138 aa)
	LOC107550743	Malignant T-cell-amplified sequence 1. (181 aa)
	LOC107589503	28S ribosomal protein S21, mitochondrial-like. (87 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002289	ENSSGRP00000003292	ENSSGRP00000002289	ENSSGRP00000003292	Small subunit ribosomal protein S3Ae.	ATP-dependent RNA helicase DHX29-like.	0.411
ENSSGRP00000002289	ENSSGRP00000003561	ENSSGRP00000002289	ENSSGRP00000003561	Small subunit ribosomal protein S3Ae.	FAU ubiquitin like and ribosomal protein S30 fusion b.	0.999
ENSSGRP00000002289	ENSSGRP00000004833	ENSSGRP00000002289	ENSSGRP00000004833	Small subunit ribosomal protein S3Ae.	annotation not available	0.980
ENSSGRP00000002289	ENSSGRP00000006085	ENSSGRP00000002289	ENSSGRP00000006085	Small subunit ribosomal protein S3Ae.	annotation not available	0.950
ENSSGRP00000002289	ENSSGRP00000006135	ENSSGRP00000002289	ENSSGRP00000006135	Small subunit ribosomal protein S3Ae.	28S ribosomal protein S7, mitochondrial-like.	0.954
ENSSGRP00000002289	ENSSGRP00000006676	ENSSGRP00000002289	ENSSGRP00000006676	Small subunit ribosomal protein S3Ae.	Small subunit ribosomal protein S19e.	0.987
ENSSGRP00000002289	ENSSGRP00000007466	ENSSGRP00000002289	ENSSGRP00000007466	Small subunit ribosomal protein S3Ae.	Small subunit ribosomal protein SAe.	0.989
ENSSGRP00000002289	ENSSGRP00000007473	ENSSGRP00000002289	ENSSGRP00000007473	Small subunit ribosomal protein S3Ae.	annotation not available	0.980
ENSSGRP00000002289	ENSSGRP00000007523	ENSSGRP00000002289	ENSSGRP00000007523	Small subunit ribosomal protein S3Ae.	annotation not available	0.980
ENSSGRP00000002289	ENSSGRP00000010538	ENSSGRP00000002289	ENSSGRP00000010538	Small subunit ribosomal protein S3Ae.	annotation not available	0.993
ENSSGRP00000002289	ENSSGRP00000016306	ENSSGRP00000002289	ENSSGRP00000016306	Small subunit ribosomal protein S3Ae.	Ribosomal protein S17.	0.998
ENSSGRP00000002289	ENSSGRP00000018465	ENSSGRP00000002289	ENSSGRP00000018465	Small subunit ribosomal protein S3Ae.	annotation not available	0.411
ENSSGRP00000002289	ENSSGRP00000018842	ENSSGRP00000002289	ENSSGRP00000018842	Small subunit ribosomal protein S3Ae.	annotation not available	0.980
ENSSGRP00000002289	ENSSGRP00000018931	ENSSGRP00000002289	ENSSGRP00000018931	Small subunit ribosomal protein S3Ae.	annotation not available	0.972
ENSSGRP00000002289	ENSSGRP00000019485	ENSSGRP00000002289	ENSSGRP00000019485	Small subunit ribosomal protein S3Ae.	annotation not available	0.958
ENSSGRP00000002289	ENSSGRP00000019849	ENSSGRP00000002289	ENSSGRP00000019849	Small subunit ribosomal protein S3Ae.	Ribosomal protein SA.	0.989
ENSSGRP00000002289	ENSSGRP00000021490	ENSSGRP00000002289	ENSSGRP00000021490	Small subunit ribosomal protein S3Ae.	28S ribosomal protein S15, mitochondrial-like.	0.964
ENSSGRP00000002289	ENSSGRP00000025079	ENSSGRP00000002289	ENSSGRP00000025079	Small subunit ribosomal protein S3Ae.	Small subunit ribosomal protein S3Ae.	0.918
ENSSGRP00000002289	ENSSGRP00000050425	ENSSGRP00000002289	ENSSGRP00000050425	Small subunit ribosomal protein S3Ae.	annotation not available	0.995
ENSSGRP00000002289	ENSSGRP00000050887	ENSSGRP00000002289	ENSSGRP00000050887	Small subunit ribosomal protein S3Ae.	Mitochondrial ribosomal protein S7.	0.954