(37 nodes) SWI/SNF complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107556978	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (506 aa)
	ENSSGRP00000061699	Glioma tumor suppressor candidate region gene 1 protein-like. (1459 aa)
	LOC107601252	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1. (420 aa)
	LOC107560559	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (507 aa)
	ENSSGRP00000073291	annotation not available (260 aa)
	ENSSGRP00000081275	annotation not available (224 aa)
	LOC107553587	B-cell CLL/lymphoma 7 protein family member A-like. (202 aa)
	LOC107548660	Actin-like protein 6A. (437 aa)
	ENSSGRP00000094856	B-cell lymphoma/leukemia 11A-like. (211 aa)
	ENSSGRP00000095990	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (487 aa)
	ENSSGRP00000102764	B-cell lymphoma/leukemia 11B-like. (772 aa)
	ENSSGRP00000105611	Zinc finger protein 296. (365 aa)
	LOC107552594	B-cell CLL/lymphoma 7 protein family member A isoform X1. (202 aa)
	LOC107590406	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1. (425 aa)
	LOC107555305	B-cell lymphoma/leukemia 11B-like isoform X1. (788 aa)
	LOC107590507	AT-rich interactive domain-containing protein 2-like isoform X1. (1607 aa)
	LOC107598696	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (497 aa)
	LOC107565091	Glioma tumor suppressor candidate region gene 1 protein-like isoform X1. (1643 aa)
	LOC107555896	AT-rich interactive domain-containing protein 2-like isoform X1. (1605 aa)
	ENSSGRP00000008359	annotation not available (106 aa)
	LOC107560207	B-cell lymphoma/leukemia 11B-like. (787 aa)
	ENSSGRP00000010883	Bromodomain-containing protein 9-like. (401 aa)
	ENSSGRP00000015190	Actin-like 6B. (328 aa)
	ENSSGRP00000015722	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like. (380 aa)
	ENSSGRP00000017226	B-cell CLL/lymphoma 7 protein family member A-like. (175 aa)
	mpnd	MPN domain-containing protein. (458 aa)
	ENSSGRP00000022504	Bromodomain containing 9. (579 aa)
	LOC107549457	Leukocyte receptor cluster member 9-like isoform X1. (586 aa)
	LOC107601892	B-cell lymphoma/leukemia 11A-like. (817 aa)
	LOC107599876	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like. (520 aa)
	ENSSGRP00000031661	Actin-like 6A. (431 aa)
	LOC107566433	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like. (513 aa)
	ENSSGRP00000044922	Zinc finger protein 296. (430 aa)
	LOC107569192	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D. (476 aa)
	LOC107598421	Leukocyte receptor cluster member 9-like. (514 aa)
	ENSSGRP00000056910	B-cell CLL/lymphoma 7 protein family member A-like isoform X1. (191 aa)
	ENSSGRP00000058743	B-cell lymphoma/leukemia 11A-like. (803 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000008359	ENSSGRP00000010883	ENSSGRP00000008359	ENSSGRP00000010883	annotation not available	Bromodomain-containing protein 9-like.	0.665
ENSSGRP00000008359	ENSSGRP00000015190	ENSSGRP00000008359	ENSSGRP00000015190	annotation not available	Actin-like 6B.	0.809
ENSSGRP00000008359	ENSSGRP00000015722	ENSSGRP00000008359	ENSSGRP00000015722	annotation not available	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like.	0.467
ENSSGRP00000008359	ENSSGRP00000017226	ENSSGRP00000008359	ENSSGRP00000017226	annotation not available	B-cell CLL/lymphoma 7 protein family member A-like.	0.477
ENSSGRP00000008359	ENSSGRP00000022504	ENSSGRP00000008359	ENSSGRP00000022504	annotation not available	Bromodomain containing 9.	0.665
ENSSGRP00000008359	ENSSGRP00000031661	ENSSGRP00000008359	ENSSGRP00000031661	annotation not available	Actin-like 6A.	0.809
ENSSGRP00000008359	ENSSGRP00000056910	ENSSGRP00000008359	ENSSGRP00000056910	annotation not available	B-cell CLL/lymphoma 7 protein family member A-like isoform X1.	0.477
ENSSGRP00000008359	LOC107548660	ENSSGRP00000008359	ENSSGRP00000090803	annotation not available	Actin-like protein 6A.	0.809
ENSSGRP00000008359	LOC107549457	ENSSGRP00000008359	ENSSGRP00000026325	annotation not available	Leukocyte receptor cluster member 9-like isoform X1.	0.792
ENSSGRP00000008359	LOC107552594	ENSSGRP00000008359	ENSSGRP00000107319	annotation not available	B-cell CLL/lymphoma 7 protein family member A isoform X1.	0.477
ENSSGRP00000008359	LOC107553587	ENSSGRP00000008359	ENSSGRP00000086998	annotation not available	B-cell CLL/lymphoma 7 protein family member A-like.	0.477
ENSSGRP00000008359	LOC107555896	ENSSGRP00000008359	ENSSGRP00000006015	annotation not available	AT-rich interactive domain-containing protein 2-like isoform X1.	0.774
ENSSGRP00000008359	LOC107560559	ENSSGRP00000008359	ENSSGRP00000066572	annotation not available	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.	0.586
ENSSGRP00000008359	LOC107569192	ENSSGRP00000008359	ENSSGRP00000045196	annotation not available	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.	0.587
ENSSGRP00000008359	LOC107590406	ENSSGRP00000008359	ENSSGRP00000108797	annotation not available	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.	0.871
ENSSGRP00000008359	LOC107590507	ENSSGRP00000008359	ENSSGRP00000111354	annotation not available	AT-rich interactive domain-containing protein 2-like isoform X1.	0.774
ENSSGRP00000008359	LOC107598421	ENSSGRP00000008359	ENSSGRP00000046282	annotation not available	Leukocyte receptor cluster member 9-like.	0.792
ENSSGRP00000008359	LOC107601252	ENSSGRP00000008359	ENSSGRP00000064808	annotation not available	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.	0.871
ENSSGRP00000010883	ENSSGRP00000008359	ENSSGRP00000010883	ENSSGRP00000008359	Bromodomain-containing protein 9-like.	annotation not available	0.665
ENSSGRP00000010883	ENSSGRP00000015190	ENSSGRP00000010883	ENSSGRP00000015190	Bromodomain-containing protein 9-like.	Actin-like 6B.	0.766