(6 nodes) Kinesin II complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000071051	Kinesin-associated protein 3a. (781 aa)
	LOC107553501	Kinesin-associated protein 3-like. (790 aa)
	ENSSGRP00000106796	Kinesin-associated protein 3b. (718 aa)
	ENSSGRP00000009680	annotation not available (122 aa)
	ENSSGRP00000039049	Kinesin-associated protein 3b. (740 aa)
	ENSSGRP00000067718	Kinesin family member 3Cb. (254 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000009680	ENSSGRP00000039049	ENSSGRP00000009680	ENSSGRP00000039049	annotation not available	Kinesin-associated protein 3b.	0.876
ENSSGRP00000009680	ENSSGRP00000071051	ENSSGRP00000009680	ENSSGRP00000071051	annotation not available	Kinesin-associated protein 3a.	0.876
ENSSGRP00000009680	ENSSGRP00000106796	ENSSGRP00000009680	ENSSGRP00000106796	annotation not available	Kinesin-associated protein 3b.	0.876
ENSSGRP00000009680	LOC107553501	ENSSGRP00000009680	ENSSGRP00000083377	annotation not available	Kinesin-associated protein 3-like.	0.876
ENSSGRP00000039049	ENSSGRP00000009680	ENSSGRP00000039049	ENSSGRP00000009680	Kinesin-associated protein 3b.	annotation not available	0.876
ENSSGRP00000039049	ENSSGRP00000067718	ENSSGRP00000039049	ENSSGRP00000067718	Kinesin-associated protein 3b.	Kinesin family member 3Cb.	0.896
ENSSGRP00000067718	ENSSGRP00000039049	ENSSGRP00000067718	ENSSGRP00000039049	Kinesin family member 3Cb.	Kinesin-associated protein 3b.	0.896
ENSSGRP00000067718	ENSSGRP00000071051	ENSSGRP00000067718	ENSSGRP00000071051	Kinesin family member 3Cb.	Kinesin-associated protein 3a.	0.896
ENSSGRP00000067718	ENSSGRP00000106796	ENSSGRP00000067718	ENSSGRP00000106796	Kinesin family member 3Cb.	Kinesin-associated protein 3b.	0.896
ENSSGRP00000067718	LOC107553501	ENSSGRP00000067718	ENSSGRP00000083377	Kinesin family member 3Cb.	Kinesin-associated protein 3-like.	0.896
ENSSGRP00000071051	ENSSGRP00000009680	ENSSGRP00000071051	ENSSGRP00000009680	Kinesin-associated protein 3a.	annotation not available	0.876
ENSSGRP00000071051	ENSSGRP00000067718	ENSSGRP00000071051	ENSSGRP00000067718	Kinesin-associated protein 3a.	Kinesin family member 3Cb.	0.896
ENSSGRP00000106796	ENSSGRP00000009680	ENSSGRP00000106796	ENSSGRP00000009680	Kinesin-associated protein 3b.	annotation not available	0.876
ENSSGRP00000106796	ENSSGRP00000067718	ENSSGRP00000106796	ENSSGRP00000067718	Kinesin-associated protein 3b.	Kinesin family member 3Cb.	0.896
LOC107553501	ENSSGRP00000009680	ENSSGRP00000083377	ENSSGRP00000009680	Kinesin-associated protein 3-like.	annotation not available	0.876
LOC107553501	ENSSGRP00000067718	ENSSGRP00000083377	ENSSGRP00000067718	Kinesin-associated protein 3-like.	Kinesin family member 3Cb.	0.896