(31 nodes) Phagocytic vesicle membrane network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107558120	EMILIN-2-like. (1000 aa)
	ENSSGRP00000043002	annotation not available (186 aa)
	ENSSGRP00000041811	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B. (265 aa)
	LOC107590076	Coronin-6-like. (500 aa)
	ENSSGRP00000031886	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2. (244 aa)
	ENSSGRP00000028703	Lysosome-associated membrane glycoprotein 1-like. (295 aa)
	ENSSGRP00000018833	annotation not available (165 aa)
	ENSSGRP00000017666	Ras-related protein Rab-9B-like. (211 aa)
	ENSSGRP00000016831	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1b. (272 aa)
	ENSSGRP00000011206	Lysosome-associated membrane glycoprotein 1-like. (204 aa)
	ENSSGRP00000007160	Coronin-1A-like isoform X1. (491 aa)
	ENSSGRP00000005501	annotation not available (85 aa)
	LOC107563993	Coronin-1A-like. (532 aa)
	pip4p1	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase. (307 aa)
	LOC107588842	Ras-related protein Rab-9A-like. (201 aa)
	LOC107588842-2	Ras-related protein Rab-9A-like. (201 aa)
	LOC107550756	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1. (954 aa)
	LOC107588759	Coronin-1B/1C/6. (501 aa)
	LOC107554658	Ras-related protein Rab-9B-like. (202 aa)
	LOC107597893	Coronin-1B-like isoform X1. (499 aa)
	LOC107558435	Coronin-1B-like. (499 aa)
	LOC107564302	Ras-related protein Rab-9A-like. (201 aa)
	ENSSGRP00000069355	EMILIN-2-like isoform X1. (1078 aa)
	ENSSGRP00000068554	Lysosome-associated membrane glycoprotein 1-like. (245 aa)
	LOC107552379	Ras-related protein Rab-9A-like. (201 aa)
	ENSSGRP00000058119	Elastin microfibril interfacer 2b. (797 aa)
	ENSSGRP00000051184	Elastin microfibril interfacer 2b. (819 aa)
	rab9a	Ras-related protein Rab-9A. (201 aa)
	LOC107560181	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1. (950 aa)
	Tmem55a	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase. (202 aa)
	ENSSGRP00000048953	Lysosome-associated membrane glycoprotein 1-like. (214 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007160	LOC107563993	ENSSGRP00000007160	ENSSGRP00000001354	Coronin-1A-like isoform X1.	Coronin-1A-like.	0.900
ENSSGRP00000041811	LOC107550756	ENSSGRP00000041811	ENSSGRP00000108997	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	0.900
ENSSGRP00000041811	LOC107560181	ENSSGRP00000041811	ENSSGRP00000050258	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	0.900
ENSSGRP00000041811	Tmem55a	ENSSGRP00000041811	ENSSGRP00000049661	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.902
ENSSGRP00000041811	pip4p1	ENSSGRP00000041811	ENSSGRP00000094130	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.901
LOC107550756	ENSSGRP00000041811	ENSSGRP00000108997	ENSSGRP00000041811	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	0.900
LOC107550756	Tmem55a	ENSSGRP00000108997	ENSSGRP00000049661	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.900
LOC107550756	pip4p1	ENSSGRP00000108997	ENSSGRP00000094130	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.900
LOC107560181	ENSSGRP00000041811	ENSSGRP00000050258	ENSSGRP00000041811	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	0.900
LOC107560181	Tmem55a	ENSSGRP00000050258	ENSSGRP00000049661	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.900
LOC107560181	pip4p1	ENSSGRP00000050258	ENSSGRP00000094130	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.900
LOC107563993	ENSSGRP00000007160	ENSSGRP00000001354	ENSSGRP00000007160	Coronin-1A-like.	Coronin-1A-like isoform X1.	0.900
Tmem55a	ENSSGRP00000041811	ENSSGRP00000049661	ENSSGRP00000041811	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	0.902
Tmem55a	LOC107550756	ENSSGRP00000049661	ENSSGRP00000108997	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	0.900
Tmem55a	LOC107560181	ENSSGRP00000049661	ENSSGRP00000050258	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	0.900
Tmem55a	pip4p1	ENSSGRP00000049661	ENSSGRP00000094130	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.902
pip4p1	ENSSGRP00000041811	ENSSGRP00000094130	ENSSGRP00000041811	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B.	0.901
pip4p1	LOC107550756	ENSSGRP00000094130	ENSSGRP00000108997	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	0.900
pip4p1	LOC107560181	ENSSGRP00000094130	ENSSGRP00000050258	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1-like isoform X1.	0.900
pip4p1	Tmem55a	ENSSGRP00000094130	ENSSGRP00000049661	Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.	0.902