(16 nodes) Ribonuclease P complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pop5	Ribonuclease P/MRP protein subunit POP5. (168 aa)
	rpp40	Ribonucleases P/MRP protein subunit RPP40. (361 aa)
	ENSSGRP00000104006	Mitochondrial ribonuclease P protein 3-like. (236 aa)
	Rpp38	Ribonucleases P/MRP protein subunit RPP38. (275 aa)
	ENSSGRP00000078813	Ribonuclease P protein subunit p21-like. (153 aa)
	ENSSGRP00000068440	annotation not available (335 aa)
	ENSSGRP00000062562	Protein only RNase P catalytic subunit. (581 aa)
	ENSSGRP00000056094	Ribonuclease P protein subunit p30-like. (261 aa)
	LOC107590861	UPF0235 protein C15orf40 homolog. (164 aa)
	ENSSGRP00000043746	annotation not available (113 aa)
	LOC107562538	Ribonuclease P protein subunit p29-like. (220 aa)
	LOC107584236	Ribonuclease P protein subunit p30-like. (270 aa)
	ENSSGRP00000027657	Putative nuclease HARBI1. (293 aa)
	ENSSGRP00000016541	annotation not available (123 aa)
	ENSSGRP00000021721	Ribonuclease P protein subunit p29-like. (218 aa)
	ENSSGRP00000002781	annotation not available (210 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000002781	ENSSGRP00000062562	ENSSGRP00000002781	ENSSGRP00000062562	annotation not available	Protein only RNase P catalytic subunit.	0.607
ENSSGRP00000002781	ENSSGRP00000104006	ENSSGRP00000002781	ENSSGRP00000104006	annotation not available	Mitochondrial ribonuclease P protein 3-like.	0.607
ENSSGRP00000016541	ENSSGRP00000021721	ENSSGRP00000016541	ENSSGRP00000021721	annotation not available	Ribonuclease P protein subunit p29-like.	0.997
ENSSGRP00000016541	ENSSGRP00000043746	ENSSGRP00000016541	ENSSGRP00000043746	annotation not available	annotation not available	0.997
ENSSGRP00000016541	ENSSGRP00000056094	ENSSGRP00000016541	ENSSGRP00000056094	annotation not available	Ribonuclease P protein subunit p30-like.	0.997
ENSSGRP00000016541	ENSSGRP00000078813	ENSSGRP00000016541	ENSSGRP00000078813	annotation not available	Ribonuclease P protein subunit p21-like.	0.997
ENSSGRP00000016541	LOC107562538	ENSSGRP00000016541	ENSSGRP00000041075	annotation not available	Ribonuclease P protein subunit p29-like.	0.997
ENSSGRP00000016541	LOC107584236	ENSSGRP00000016541	ENSSGRP00000027759	annotation not available	Ribonuclease P protein subunit p30-like.	0.997
ENSSGRP00000016541	Rpp38	ENSSGRP00000016541	ENSSGRP00000089430	annotation not available	Ribonucleases P/MRP protein subunit RPP38.	0.991
ENSSGRP00000016541	pop5	ENSSGRP00000016541	ENSSGRP00000112903	annotation not available	Ribonuclease P/MRP protein subunit POP5.	0.999
ENSSGRP00000021721	ENSSGRP00000016541	ENSSGRP00000021721	ENSSGRP00000016541	Ribonuclease P protein subunit p29-like.	annotation not available	0.997
ENSSGRP00000021721	ENSSGRP00000043746	ENSSGRP00000021721	ENSSGRP00000043746	Ribonuclease P protein subunit p29-like.	annotation not available	0.992
ENSSGRP00000021721	ENSSGRP00000056094	ENSSGRP00000021721	ENSSGRP00000056094	Ribonuclease P protein subunit p29-like.	Ribonuclease P protein subunit p30-like.	0.995
ENSSGRP00000021721	ENSSGRP00000078813	ENSSGRP00000021721	ENSSGRP00000078813	Ribonuclease P protein subunit p29-like.	Ribonuclease P protein subunit p21-like.	0.992
ENSSGRP00000021721	LOC107584236	ENSSGRP00000021721	ENSSGRP00000027759	Ribonuclease P protein subunit p29-like.	Ribonuclease P protein subunit p30-like.	0.995
ENSSGRP00000021721	Rpp38	ENSSGRP00000021721	ENSSGRP00000089430	Ribonuclease P protein subunit p29-like.	Ribonucleases P/MRP protein subunit RPP38.	0.996
ENSSGRP00000021721	pop5	ENSSGRP00000021721	ENSSGRP00000112903	Ribonuclease P protein subunit p29-like.	Ribonuclease P/MRP protein subunit POP5.	0.997
ENSSGRP00000021721	rpp40	ENSSGRP00000021721	ENSSGRP00000107426	Ribonuclease P protein subunit p29-like.	Ribonucleases P/MRP protein subunit RPP40.	0.486
ENSSGRP00000027657	ENSSGRP00000062562	ENSSGRP00000027657	ENSSGRP00000062562	Putative nuclease HARBI1.	Protein only RNase P catalytic subunit.	0.497
ENSSGRP00000027657	ENSSGRP00000104006	ENSSGRP00000027657	ENSSGRP00000104006	Putative nuclease HARBI1.	Mitochondrial ribonuclease P protein 3-like.	0.497