(36 nodes) P granule network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000055008	Tudor domain-containing protein 5-like. (614 aa)
	LOC107554283-4	Dynein light chain 2, cytoplasmic. (89 aa)
	LOC107592689	Tudor domain-containing protein 5-like. (911 aa)
	LOC107596949	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like. (479 aa)
	LOC107557954	Tudor domain-containing protein 1/4/6/7. (1077 aa)
	LOC107554283-3	Dynein light chain 2, cytoplasmic. (89 aa)
	LOC107587089	Dead end protein 1-like. (377 aa)
	LOC107584532	Uncharacterized protein LOC107584532. (632 aa)
	LOC107594352	Nanos homolog 3-like. (165 aa)
	LOC107601273	Small RNA 2'-O-methyltransferase-like isoform X1. (405 aa)
	ENSSGRP00000067585	Tudor domain containing 9. (985 aa)
	ENSSGRP00000067484	Tudor domain-containing protein 1/4/6/7. (1790 aa)
	LOC107560971	Piwi-like protein 2. (1090 aa)
	LOC107555628	Small RNA 2'-O-methyltransferase-like. (411 aa)
	LOC107601535	Tudor domain-containing protein 6-like isoform X1. (2125 aa)
	ENSSGRP00000047530	Nanos homolog 3-like. (143 aa)
	ENSSGRP00000043832	Uncharacterized protein LOC107577482. (476 aa)
	LOC107559292	Dead end protein 1-like. (376 aa)
	LOC107583750	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1. (479 aa)
	LOC107567412	Uncharacterized protein LOC107567412. (632 aa)
	ENSSGRP00000035644	Tudor domain-containing protein 1/4/6/7. (1132 aa)
	ENSSGRP00000029548	annotation not available (77 aa)
	tdrkh	Tudor and KH domain-containing protein isoform X1. (904 aa)
	LOC107554283-2	Dynein light chain 2, cytoplasmic. (89 aa)
	LOC107596633	Uncharacterized protein C8orf88-like isoform X1. (147 aa)
	ENSSGRP00000021725	Probable ATP-dependent RNA helicase DDX4. (70 aa)
	LOC107590589	Calcium-regulated heat stable protein 1-like. (158 aa)
	DDX4	Probable ATP-dependent RNA helicase DDX4. (462 aa)
	exd1	Exonuclease 3'-5' domain-containing protein 1. (366 aa)
	piwil1	Piwi-like protein 1. (858 aa)
	LOC107581549	Tudor domain-containing protein 1/4/6/7. (1185 aa)
	LOC107581534	Uncharacterized protein C8orf88-like isoform X1. (158 aa)
	LOC107576530	Calcium-regulated heat stable protein 1-like. (158 aa)
	LOC107554283	Dynein light chain 2, cytoplasmic-like. (128 aa)
	LOC107561271	Piwi-like protein 2. (1046 aa)
	LOC107564078	Tudor domain-containing protein 1/4/6/7. (1073 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX4	ENSSGRP00000035644	ENSSGRP00000018461	ENSSGRP00000035644	Probable ATP-dependent RNA helicase DDX4.	Tudor domain-containing protein 1/4/6/7.	0.425
DDX4	ENSSGRP00000047530	ENSSGRP00000018461	ENSSGRP00000047530	Probable ATP-dependent RNA helicase DDX4.	Nanos homolog 3-like.	0.411
DDX4	ENSSGRP00000067484	ENSSGRP00000018461	ENSSGRP00000067484	Probable ATP-dependent RNA helicase DDX4.	Tudor domain-containing protein 1/4/6/7.	0.469
DDX4	ENSSGRP00000067585	ENSSGRP00000018461	ENSSGRP00000067585	Probable ATP-dependent RNA helicase DDX4.	Tudor domain containing 9.	0.559
DDX4	LOC107559292	ENSSGRP00000018461	ENSSGRP00000041526	Probable ATP-dependent RNA helicase DDX4.	Dead end protein 1-like.	0.450
DDX4	LOC107560971	ENSSGRP00000018461	ENSSGRP00000058678	Probable ATP-dependent RNA helicase DDX4.	Piwi-like protein 2.	0.649
DDX4	LOC107561271	ENSSGRP00000018461	ENSSGRP00000001374	Probable ATP-dependent RNA helicase DDX4.	Piwi-like protein 2.	0.649
DDX4	LOC107581549	ENSSGRP00000018461	ENSSGRP00000013538	Probable ATP-dependent RNA helicase DDX4.	Tudor domain-containing protein 1/4/6/7.	0.425
DDX4	LOC107583750	ENSSGRP00000018461	ENSSGRP00000038148	Probable ATP-dependent RNA helicase DDX4.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	0.467
DDX4	LOC107587089	ENSSGRP00000018461	ENSSGRP00000085512	Probable ATP-dependent RNA helicase DDX4.	Dead end protein 1-like.	0.450
DDX4	LOC107594352	ENSSGRP00000018461	ENSSGRP00000081552	Probable ATP-dependent RNA helicase DDX4.	Nanos homolog 3-like.	0.411
DDX4	LOC107596949	ENSSGRP00000018461	ENSSGRP00000103990	Probable ATP-dependent RNA helicase DDX4.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like.	0.467
DDX4	LOC107601535	ENSSGRP00000018461	ENSSGRP00000048495	Probable ATP-dependent RNA helicase DDX4.	Tudor domain-containing protein 6-like isoform X1.	0.469
DDX4	piwil1	ENSSGRP00000018461	ENSSGRP00000015377	Probable ATP-dependent RNA helicase DDX4.	Piwi-like protein 1.	0.744
ENSSGRP00000021725	ENSSGRP00000035644	ENSSGRP00000021725	ENSSGRP00000035644	Probable ATP-dependent RNA helicase DDX4.	Tudor domain-containing protein 1/4/6/7.	0.425
ENSSGRP00000021725	ENSSGRP00000047530	ENSSGRP00000021725	ENSSGRP00000047530	Probable ATP-dependent RNA helicase DDX4.	Nanos homolog 3-like.	0.411
ENSSGRP00000021725	ENSSGRP00000067484	ENSSGRP00000021725	ENSSGRP00000067484	Probable ATP-dependent RNA helicase DDX4.	Tudor domain-containing protein 1/4/6/7.	0.469
ENSSGRP00000021725	ENSSGRP00000067585	ENSSGRP00000021725	ENSSGRP00000067585	Probable ATP-dependent RNA helicase DDX4.	Tudor domain containing 9.	0.559
ENSSGRP00000021725	LOC107559292	ENSSGRP00000021725	ENSSGRP00000041526	Probable ATP-dependent RNA helicase DDX4.	Dead end protein 1-like.	0.450
ENSSGRP00000021725	LOC107560971	ENSSGRP00000021725	ENSSGRP00000058678	Probable ATP-dependent RNA helicase DDX4.	Piwi-like protein 2.	0.649