(25 nodes) TCP-1/cpn60 chaperonin family network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000104498	1-phosphatidylinositol 3-phosphate 5-kinase-like. (1983 aa)
	LOC107595854	1-phosphatidylinositol 3-phosphate 5-kinase-like isoform X1. (2100 aa)
	LOC107595848	60 kDa heat shock protein, mitochondrial-like. (575 aa)
	LOC107569661	60 kDa heat shock protein, mitochondrial. (592 aa)
	bbs12	Bardet-Biedl syndrome 12 protein isoform X1. (593 aa)
	LOC107597996	T-complex protein 1 subunit gamma-like. (544 aa)
	ENSSGRP00000089633	T-complex protein 1 subunit delta-like. (478 aa)
	ENSSGRP00000087265	Chaperonin containing TCP1, subunit 8 (theta). (519 aa)
	Cct6a	T-complex protein 1 subunit zeta. (535 aa)
	mkks	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X1. (533 aa)
	LOC107549193	T-complex protein 1 subunit epsilon-like. (531 aa)
	LOC107549175	T-complex protein 1 subunit alpha. (558 aa)
	LOC107601001	Bardet-Biedl syndrome 10 protein homolog. (587 aa)
	cct8	T-complex protein 1 subunit theta isoform X1. (558 aa)
	cct5	T-complex protein 1 subunit epsilon. (541 aa)
	cct4	T-complex protein 1 subunit delta. (544 aa)
	ENSSGRP00000049191	Bardet-Biedl syndrome 12. (337 aa)
	CCT2	Chaperonin containing TCP1 subunit 2. (568 aa)
	Cct2	T-complex protein 1 subunit beta. (327 aa)
	LOC107558788	T-complex protein 1 subunit alpha. (470 aa)
	LOC107571935	T-complex protein 1 subunit eta-like. (549 aa)
	LOC107587818	T-complex protein 1 subunit gamma. (563 aa)
	ENSSGRP00000023621	annotation not available (168 aa)
	ENSSGRP00000027910	annotation not available (489 aa)
	ENSSGRP00000032672	T-complex protein 1 subunit eta. (549 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT2	Cct6a	ENSSGRP00000048760	ENSSGRP00000082674	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit zeta.	0.997
CCT2	ENSSGRP00000027910	ENSSGRP00000048760	ENSSGRP00000027910	Chaperonin containing TCP1 subunit 2.	annotation not available	0.997
CCT2	ENSSGRP00000032672	ENSSGRP00000048760	ENSSGRP00000032672	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit eta.	0.997
CCT2	ENSSGRP00000049191	ENSSGRP00000048760	ENSSGRP00000049191	Chaperonin containing TCP1 subunit 2.	Bardet-Biedl syndrome 12.	0.601
CCT2	ENSSGRP00000087265	ENSSGRP00000048760	ENSSGRP00000087265	Chaperonin containing TCP1 subunit 2.	Chaperonin containing TCP1, subunit 8 (theta).	0.997
CCT2	ENSSGRP00000089633	ENSSGRP00000048760	ENSSGRP00000089633	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit delta-like.	0.997
CCT2	LOC107549175	ENSSGRP00000048760	ENSSGRP00000066716	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit alpha.	0.997
CCT2	LOC107549193	ENSSGRP00000048760	ENSSGRP00000068685	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit epsilon-like.	0.997
CCT2	LOC107558788	ENSSGRP00000048760	ENSSGRP00000046012	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit alpha.	0.997
CCT2	LOC107569661	ENSSGRP00000048760	ENSSGRP00000105469	Chaperonin containing TCP1 subunit 2.	60 kDa heat shock protein, mitochondrial.	0.583
CCT2	LOC107571935	ENSSGRP00000048760	ENSSGRP00000043936	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit eta-like.	0.997
CCT2	LOC107587818	ENSSGRP00000048760	ENSSGRP00000011447	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit gamma.	0.997
CCT2	LOC107595848	ENSSGRP00000048760	ENSSGRP00000105834	Chaperonin containing TCP1 subunit 2.	60 kDa heat shock protein, mitochondrial-like.	0.583
CCT2	LOC107597996	ENSSGRP00000048760	ENSSGRP00000091333	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit gamma-like.	0.997
CCT2	LOC107601001	ENSSGRP00000048760	ENSSGRP00000062911	Chaperonin containing TCP1 subunit 2.	Bardet-Biedl syndrome 10 protein homolog.	0.987
CCT2	bbs12	ENSSGRP00000048760	ENSSGRP00000095660	Chaperonin containing TCP1 subunit 2.	Bardet-Biedl syndrome 12 protein isoform X1.	0.601
CCT2	cct4	ENSSGRP00000048760	ENSSGRP00000052912	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit delta.	0.997
CCT2	cct5	ENSSGRP00000048760	ENSSGRP00000053486	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit epsilon.	0.997
CCT2	cct8	ENSSGRP00000048760	ENSSGRP00000061465	Chaperonin containing TCP1 subunit 2.	T-complex protein 1 subunit theta isoform X1.	0.997
CCT2	mkks	ENSSGRP00000048760	ENSSGRP00000075635	Chaperonin containing TCP1 subunit 2.	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X1.	0.987