(13 nodes) Hsp90 protein network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000012815	annotation not available (115 aa)
	ENSSGRP00000016144	Heat shock protein 90kDa beta. (639 aa)
	ENSSGRP00000028234	Heat shock protein 75 kDa, mitochondrial-like. (716 aa)
	ENSSGRP00000048561	TNF receptor-associated protein 1. (708 aa)
	Trap1	Heat shock protein 75 kDa, mitochondrial. (495 aa)
	LOC107592208	Heat shock protein 90kDa beta. (524 aa)
	ENSSGRP00000072329	Heat shock protein HSP 90-beta. (802 aa)
	ENSSGRP00000092420	Heat shock protein 90kDa beta. (675 aa)
	ENSSGRP00000096121	TNF receptor-associated protein 1. (506 aa)
	LOC107559118	Heat shock protein HSP 90-beta-like isoform X1. (737 aa)
	LOC107557012	Heat shock protein HSP 90-alpha 1 isoform X1. (769 aa)
	LOC107564585	Heat shock protein HSP 90-alpha 1 isoform X1. (728 aa)
	ENSSGRP00000012813	Heat shock protein HSP 90-alpha. (115 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000012813	ENSSGRP00000028234	ENSSGRP00000012813	ENSSGRP00000028234	Heat shock protein HSP 90-alpha.	Heat shock protein 75 kDa, mitochondrial-like.	0.557
ENSSGRP00000012813	ENSSGRP00000048561	ENSSGRP00000012813	ENSSGRP00000048561	Heat shock protein HSP 90-alpha.	TNF receptor-associated protein 1.	0.552
ENSSGRP00000012813	ENSSGRP00000072329	ENSSGRP00000012813	ENSSGRP00000072329	Heat shock protein HSP 90-alpha.	Heat shock protein HSP 90-beta.	0.445
ENSSGRP00000012813	ENSSGRP00000096121	ENSSGRP00000012813	ENSSGRP00000096121	Heat shock protein HSP 90-alpha.	TNF receptor-associated protein 1.	0.543
ENSSGRP00000012813	LOC107559118	ENSSGRP00000012813	ENSSGRP00000094450	Heat shock protein HSP 90-alpha.	Heat shock protein HSP 90-beta-like isoform X1.	0.445
ENSSGRP00000012813	LOC107592208	ENSSGRP00000012813	ENSSGRP00000050091	Heat shock protein HSP 90-alpha.	Heat shock protein 90kDa beta.	0.631
ENSSGRP00000012813	Trap1	ENSSGRP00000012813	ENSSGRP00000048970	Heat shock protein HSP 90-alpha.	Heat shock protein 75 kDa, mitochondrial.	0.549
ENSSGRP00000012815	ENSSGRP00000028234	ENSSGRP00000012815	ENSSGRP00000028234	annotation not available	Heat shock protein 75 kDa, mitochondrial-like.	0.557
ENSSGRP00000012815	ENSSGRP00000048561	ENSSGRP00000012815	ENSSGRP00000048561	annotation not available	TNF receptor-associated protein 1.	0.552
ENSSGRP00000012815	ENSSGRP00000072329	ENSSGRP00000012815	ENSSGRP00000072329	annotation not available	Heat shock protein HSP 90-beta.	0.445
ENSSGRP00000012815	ENSSGRP00000096121	ENSSGRP00000012815	ENSSGRP00000096121	annotation not available	TNF receptor-associated protein 1.	0.543
ENSSGRP00000012815	LOC107559118	ENSSGRP00000012815	ENSSGRP00000094450	annotation not available	Heat shock protein HSP 90-beta-like isoform X1.	0.445
ENSSGRP00000012815	LOC107592208	ENSSGRP00000012815	ENSSGRP00000050091	annotation not available	Heat shock protein 90kDa beta.	0.631
ENSSGRP00000012815	Trap1	ENSSGRP00000012815	ENSSGRP00000048970	annotation not available	Heat shock protein 75 kDa, mitochondrial.	0.549
ENSSGRP00000016144	ENSSGRP00000092420	ENSSGRP00000016144	ENSSGRP00000092420	Heat shock protein 90kDa beta.	Heat shock protein 90kDa beta.	0.900
ENSSGRP00000016144	LOC107592208	ENSSGRP00000016144	ENSSGRP00000050091	Heat shock protein 90kDa beta.	Heat shock protein 90kDa beta.	0.902
ENSSGRP00000028234	ENSSGRP00000012813	ENSSGRP00000028234	ENSSGRP00000012813	Heat shock protein 75 kDa, mitochondrial-like.	Heat shock protein HSP 90-alpha.	0.557
ENSSGRP00000028234	ENSSGRP00000012815	ENSSGRP00000028234	ENSSGRP00000012815	Heat shock protein 75 kDa, mitochondrial-like.	annotation not available	0.557
ENSSGRP00000048561	ENSSGRP00000012813	ENSSGRP00000048561	ENSSGRP00000012813	TNF receptor-associated protein 1.	Heat shock protein HSP 90-alpha.	0.552
ENSSGRP00000048561	ENSSGRP00000012815	ENSSGRP00000048561	ENSSGRP00000012815	TNF receptor-associated protein 1.	annotation not available	0.552