(22 nodes) Adaptor complexes medium subunit family network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000079543	Adaptor related protein complex 1 subunit mu 1. (321 aa)
	ENSSGRP00000016856	Coatomer subunit delta-like. (519 aa)
	LOC107587342	Coatomer subunit delta-like. (530 aa)
	LOC107573972	AP-1 complex subunit mu-2-like. (237 aa)
	LOC107583485	Stonin-2-like isoform X1. (860 aa)
	LOC107593770	AP-2 complex subunit mu-A isoform X1. (436 aa)
	ENSSGRP00000106142	AP-2 complex subunit mu-B-like. (372 aa)
	ENSSGRP00000064613	AP-2 complex subunit mu-like. (418 aa)
	Ston1	Stonin-1/2. (627 aa)
	ENSSGRP00000027398	Archain 1a. (527 aa)
	ap5m1	AP-5 complex subunit mu-1. (492 aa)
	LOC107588275	Stonin-2-like isoform X1. (859 aa)
	LOC107551816	AP-3 complex subunit mu-2. (428 aa)
	LOC107601875	AP-3 complex subunit mu-1-like isoform X1. (418 aa)
	LOC107559324	AP-3 complex subunit mu-1. (432 aa)
	LOC107554303	AP-4 complex subunit mu-1-like. (463 aa)
	Ap1m1	AP-1 complex subunit mu-1 isoform X1. (478 aa)
	LOC107586161	AP-4 complex subunit mu-1-like. (442 aa)
	LOC107557385	AP-3 complex subunit mu-2-like. (418 aa)
	ENSSGRP00000088719	AP-2 complex subunit mu-A-like isoform X1. (434 aa)
	LOC107597516	Coatomer subunit delta-like. (524 aa)
	AP1M2	AP-1 complex subunit mu-2. (432 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000064613	LOC107551816	ENSSGRP00000064613	ENSSGRP00000097036	AP-2 complex subunit mu-like.	AP-3 complex subunit mu-2.	0.433
ENSSGRP00000064613	LOC107557385	ENSSGRP00000064613	ENSSGRP00000091020	AP-2 complex subunit mu-like.	AP-3 complex subunit mu-2-like.	0.433
ENSSGRP00000064613	LOC107559324	ENSSGRP00000064613	ENSSGRP00000046829	AP-2 complex subunit mu-like.	AP-3 complex subunit mu-1.	0.433
ENSSGRP00000064613	LOC107583485	ENSSGRP00000064613	ENSSGRP00000071625	AP-2 complex subunit mu-like.	Stonin-2-like isoform X1.	0.844
ENSSGRP00000064613	LOC107588275	ENSSGRP00000064613	ENSSGRP00000102326	AP-2 complex subunit mu-like.	Stonin-2-like isoform X1.	0.844
ENSSGRP00000064613	LOC107601875	ENSSGRP00000064613	ENSSGRP00000012059	AP-2 complex subunit mu-like.	AP-3 complex subunit mu-1-like isoform X1.	0.433
ENSSGRP00000064613	Ston1	ENSSGRP00000064613	ENSSGRP00000054257	AP-2 complex subunit mu-like.	Stonin-1/2.	0.798
ENSSGRP00000088719	ENSSGRP00000106142	ENSSGRP00000088719	ENSSGRP00000106142	AP-2 complex subunit mu-A-like isoform X1.	AP-2 complex subunit mu-B-like.	0.901
ENSSGRP00000088719	LOC107551816	ENSSGRP00000088719	ENSSGRP00000097036	AP-2 complex subunit mu-A-like isoform X1.	AP-3 complex subunit mu-2.	0.433
ENSSGRP00000088719	LOC107557385	ENSSGRP00000088719	ENSSGRP00000091020	AP-2 complex subunit mu-A-like isoform X1.	AP-3 complex subunit mu-2-like.	0.433
ENSSGRP00000088719	LOC107559324	ENSSGRP00000088719	ENSSGRP00000046829	AP-2 complex subunit mu-A-like isoform X1.	AP-3 complex subunit mu-1.	0.433
ENSSGRP00000088719	LOC107583485	ENSSGRP00000088719	ENSSGRP00000071625	AP-2 complex subunit mu-A-like isoform X1.	Stonin-2-like isoform X1.	0.844
ENSSGRP00000088719	LOC107588275	ENSSGRP00000088719	ENSSGRP00000102326	AP-2 complex subunit mu-A-like isoform X1.	Stonin-2-like isoform X1.	0.844
ENSSGRP00000088719	LOC107593770	ENSSGRP00000088719	ENSSGRP00000108622	AP-2 complex subunit mu-A-like isoform X1.	AP-2 complex subunit mu-A isoform X1.	0.900
ENSSGRP00000088719	LOC107601875	ENSSGRP00000088719	ENSSGRP00000012059	AP-2 complex subunit mu-A-like isoform X1.	AP-3 complex subunit mu-1-like isoform X1.	0.433
ENSSGRP00000088719	Ston1	ENSSGRP00000088719	ENSSGRP00000054257	AP-2 complex subunit mu-A-like isoform X1.	Stonin-1/2.	0.798
ENSSGRP00000106142	ENSSGRP00000088719	ENSSGRP00000106142	ENSSGRP00000088719	AP-2 complex subunit mu-B-like.	AP-2 complex subunit mu-A-like isoform X1.	0.901
ENSSGRP00000106142	LOC107551816	ENSSGRP00000106142	ENSSGRP00000097036	AP-2 complex subunit mu-B-like.	AP-3 complex subunit mu-2.	0.433
ENSSGRP00000106142	LOC107557385	ENSSGRP00000106142	ENSSGRP00000091020	AP-2 complex subunit mu-B-like.	AP-3 complex subunit mu-2-like.	0.433
ENSSGRP00000106142	LOC107559324	ENSSGRP00000106142	ENSSGRP00000046829	AP-2 complex subunit mu-B-like.	AP-3 complex subunit mu-1.	0.433