(12 nodes) Myc amino-terminal region network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107596778	Transcriptional regulator Myc-2-like. (363 aa)
	LOC107576479	L-myc proto-oncogene protein. (372 aa)
	LOC107584272	L-myc proto-oncogene protein. (401 aa)
	ENSSGRP00000045891	MYC proto-oncogene, bHLH transcription factor b. (382 aa)
	ENSSGRP00000055604	N-myc proto-oncogene protein-like. (453 aa)
	LOC107558335	Transcriptional regulator Myc-1. (388 aa)
	LOC107584016	Transcriptional regulator Myc-B isoform X1. (396 aa)
	ENSSGRP00000074346	N-myc proto-oncogene protein-like isoform X1. (455 aa)
	LOC107562763	L-myc proto-oncogene protein. (404 aa)
	LOC107554180	Transcriptional regulator Myc-2-like isoform X1. (363 aa)
	LOC107553198	L-myc proto-oncogene protein. (373 aa)
	LOC107589955	Transcriptional regulator Myc-2. (443 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000045891	ENSSGRP00000055604	ENSSGRP00000045891	ENSSGRP00000055604	MYC proto-oncogene, bHLH transcription factor b.	N-myc proto-oncogene protein-like.	0.501
ENSSGRP00000045891	ENSSGRP00000074346	ENSSGRP00000045891	ENSSGRP00000074346	MYC proto-oncogene, bHLH transcription factor b.	N-myc proto-oncogene protein-like isoform X1.	0.501
ENSSGRP00000055604	ENSSGRP00000045891	ENSSGRP00000055604	ENSSGRP00000045891	N-myc proto-oncogene protein-like.	MYC proto-oncogene, bHLH transcription factor b.	0.501
ENSSGRP00000055604	LOC107553198	ENSSGRP00000055604	ENSSGRP00000098928	N-myc proto-oncogene protein-like.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000055604	LOC107554180	ENSSGRP00000055604	ENSSGRP00000086489	N-myc proto-oncogene protein-like.	Transcriptional regulator Myc-2-like isoform X1.	0.501
ENSSGRP00000055604	LOC107558335	ENSSGRP00000055604	ENSSGRP00000057029	N-myc proto-oncogene protein-like.	Transcriptional regulator Myc-1.	0.501
ENSSGRP00000055604	LOC107562763	ENSSGRP00000055604	ENSSGRP00000082430	N-myc proto-oncogene protein-like.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000055604	LOC107576479	ENSSGRP00000055604	ENSSGRP00000005678	N-myc proto-oncogene protein-like.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000055604	LOC107584016	ENSSGRP00000055604	ENSSGRP00000064855	N-myc proto-oncogene protein-like.	Transcriptional regulator Myc-B isoform X1.	0.501
ENSSGRP00000055604	LOC107584272	ENSSGRP00000055604	ENSSGRP00000033500	N-myc proto-oncogene protein-like.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000055604	LOC107589955	ENSSGRP00000055604	ENSSGRP00000110793	N-myc proto-oncogene protein-like.	Transcriptional regulator Myc-2.	0.501
ENSSGRP00000055604	LOC107596778	ENSSGRP00000055604	ENSSGRP00000070786	N-myc proto-oncogene protein-like.	Transcriptional regulator Myc-2-like.	0.501
ENSSGRP00000074346	ENSSGRP00000045891	ENSSGRP00000074346	ENSSGRP00000045891	N-myc proto-oncogene protein-like isoform X1.	MYC proto-oncogene, bHLH transcription factor b.	0.501
ENSSGRP00000074346	LOC107553198	ENSSGRP00000074346	ENSSGRP00000098928	N-myc proto-oncogene protein-like isoform X1.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000074346	LOC107554180	ENSSGRP00000074346	ENSSGRP00000086489	N-myc proto-oncogene protein-like isoform X1.	Transcriptional regulator Myc-2-like isoform X1.	0.501
ENSSGRP00000074346	LOC107558335	ENSSGRP00000074346	ENSSGRP00000057029	N-myc proto-oncogene protein-like isoform X1.	Transcriptional regulator Myc-1.	0.501
ENSSGRP00000074346	LOC107562763	ENSSGRP00000074346	ENSSGRP00000082430	N-myc proto-oncogene protein-like isoform X1.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000074346	LOC107576479	ENSSGRP00000074346	ENSSGRP00000005678	N-myc proto-oncogene protein-like isoform X1.	L-myc proto-oncogene protein.	0.501
ENSSGRP00000074346	LOC107584016	ENSSGRP00000074346	ENSSGRP00000064855	N-myc proto-oncogene protein-like isoform X1.	Transcriptional regulator Myc-B isoform X1.	0.501
ENSSGRP00000074346	LOC107584272	ENSSGRP00000074346	ENSSGRP00000033500	N-myc proto-oncogene protein-like isoform X1.	L-myc proto-oncogene protein.	0.501