(11 nodes) Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000004918	annotation not available (129 aa)
	Pgm2l1	Glucose 1,6-bisphosphate synthase. (622 aa)
	LOC107551595	Phosphoglucomutase / phosphopentomutase. (611 aa)
	ENSSGRP00000022684	Phosphoglucomutase 2-like 1. (564 aa)
	LOC107559363	Phosphoglucomutase-1-like. (581 aa)
	LOC107579473	Phosphoacetylglucosamine mutase-like isoform X1. (557 aa)
	LOC107600012	Phosphoglucomutase-like protein 5. (567 aa)
	LOC107591526	Phosphoglucomutase / phosphopentomutase. (611 aa)
	ENSSGRP00000095140	Phosphoglucomutase 5. (385 aa)
	LOC107583966	Phosphoacetylglucosamine mutase-like. (594 aa)
	LOC107593886	Phosphoglucomutase-1-like. (609 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004918	ENSSGRP00000022684	ENSSGRP00000004918	ENSSGRP00000022684	annotation not available	Phosphoglucomutase 2-like 1.	0.711
ENSSGRP00000004918	LOC107551595	ENSSGRP00000004918	ENSSGRP00000020483	annotation not available	Phosphoglucomutase / phosphopentomutase.	0.711
ENSSGRP00000004918	LOC107579473	ENSSGRP00000004918	ENSSGRP00000068813	annotation not available	Phosphoacetylglucosamine mutase-like isoform X1.	0.760
ENSSGRP00000004918	LOC107583966	ENSSGRP00000004918	ENSSGRP00000095568	annotation not available	Phosphoacetylglucosamine mutase-like.	0.760
ENSSGRP00000004918	LOC107591526	ENSSGRP00000004918	ENSSGRP00000090958	annotation not available	Phosphoglucomutase / phosphopentomutase.	0.711
ENSSGRP00000004918	Pgm2l1	ENSSGRP00000004918	ENSSGRP00000019824	annotation not available	Glucose 1,6-bisphosphate synthase.	0.711
ENSSGRP00000022684	ENSSGRP00000004918	ENSSGRP00000022684	ENSSGRP00000004918	Phosphoglucomutase 2-like 1.	annotation not available	0.711
ENSSGRP00000022684	ENSSGRP00000095140	ENSSGRP00000022684	ENSSGRP00000095140	Phosphoglucomutase 2-like 1.	Phosphoglucomutase 5.	0.764
ENSSGRP00000022684	LOC107559363	ENSSGRP00000022684	ENSSGRP00000058890	Phosphoglucomutase 2-like 1.	Phosphoglucomutase-1-like.	0.711
ENSSGRP00000022684	LOC107579473	ENSSGRP00000022684	ENSSGRP00000068813	Phosphoglucomutase 2-like 1.	Phosphoacetylglucosamine mutase-like isoform X1.	0.526
ENSSGRP00000022684	LOC107583966	ENSSGRP00000022684	ENSSGRP00000095568	Phosphoglucomutase 2-like 1.	Phosphoacetylglucosamine mutase-like.	0.526
ENSSGRP00000022684	LOC107593886	ENSSGRP00000022684	ENSSGRP00000109646	Phosphoglucomutase 2-like 1.	Phosphoglucomutase-1-like.	0.711
ENSSGRP00000022684	LOC107600012	ENSSGRP00000022684	ENSSGRP00000089775	Phosphoglucomutase 2-like 1.	Phosphoglucomutase-like protein 5.	0.764
ENSSGRP00000095140	ENSSGRP00000022684	ENSSGRP00000095140	ENSSGRP00000022684	Phosphoglucomutase 5.	Phosphoglucomutase 2-like 1.	0.764
ENSSGRP00000095140	LOC107551595	ENSSGRP00000095140	ENSSGRP00000020483	Phosphoglucomutase 5.	Phosphoglucomutase / phosphopentomutase.	0.725
ENSSGRP00000095140	LOC107579473	ENSSGRP00000095140	ENSSGRP00000068813	Phosphoglucomutase 5.	Phosphoacetylglucosamine mutase-like isoform X1.	0.777
ENSSGRP00000095140	LOC107583966	ENSSGRP00000095140	ENSSGRP00000095568	Phosphoglucomutase 5.	Phosphoacetylglucosamine mutase-like.	0.777
ENSSGRP00000095140	LOC107591526	ENSSGRP00000095140	ENSSGRP00000090958	Phosphoglucomutase 5.	Phosphoglucomutase / phosphopentomutase.	0.725
ENSSGRP00000095140	Pgm2l1	ENSSGRP00000095140	ENSSGRP00000019824	Phosphoglucomutase 5.	Glucose 1,6-bisphosphate synthase.	0.764
LOC107551595	ENSSGRP00000004918	ENSSGRP00000020483	ENSSGRP00000004918	Phosphoglucomutase / phosphopentomutase.	annotation not available	0.711