(7 nodes) HIT zinc finger network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107570413	Box C/D snoRNA protein 1-like. (459 aa)
	LOC107548862	Zinc finger HIT domain-containing protein 2-like. (526 aa)
	ENSSGRP00000027964	annotation not available (212 aa)
	ENSSGRP00000040387	Box C/D snoRNA protein 1-like isoform X1. (253 aa)
	LOC107555156	Zinc finger HIT domain-containing protein 2-like. (537 aa)
	znhit1	Zinc finger HIT domain-containing protein 1. (154 aa)
	LOC107553541	INO80 complex subunit B-like. (342 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000040387	LOC107548862	ENSSGRP00000040387	ENSSGRP00000003543	Box C/D snoRNA protein 1-like isoform X1.	Zinc finger HIT domain-containing protein 2-like.	0.518
ENSSGRP00000040387	LOC107553541	ENSSGRP00000040387	ENSSGRP00000086143	Box C/D snoRNA protein 1-like isoform X1.	INO80 complex subunit B-like.	0.406
ENSSGRP00000040387	LOC107555156	ENSSGRP00000040387	ENSSGRP00000074937	Box C/D snoRNA protein 1-like isoform X1.	Zinc finger HIT domain-containing protein 2-like.	0.518
ENSSGRP00000040387	znhit1	ENSSGRP00000040387	ENSSGRP00000082504	Box C/D snoRNA protein 1-like isoform X1.	Zinc finger HIT domain-containing protein 1.	0.645
LOC107548862	ENSSGRP00000040387	ENSSGRP00000003543	ENSSGRP00000040387	Zinc finger HIT domain-containing protein 2-like.	Box C/D snoRNA protein 1-like isoform X1.	0.518
LOC107548862	LOC107553541	ENSSGRP00000003543	ENSSGRP00000086143	Zinc finger HIT domain-containing protein 2-like.	INO80 complex subunit B-like.	0.656
LOC107548862	LOC107570413	ENSSGRP00000003543	ENSSGRP00000068424	Zinc finger HIT domain-containing protein 2-like.	Box C/D snoRNA protein 1-like.	0.518
LOC107548862	znhit1	ENSSGRP00000003543	ENSSGRP00000082504	Zinc finger HIT domain-containing protein 2-like.	Zinc finger HIT domain-containing protein 1.	0.479
LOC107553541	ENSSGRP00000040387	ENSSGRP00000086143	ENSSGRP00000040387	INO80 complex subunit B-like.	Box C/D snoRNA protein 1-like isoform X1.	0.406
LOC107553541	LOC107548862	ENSSGRP00000086143	ENSSGRP00000003543	INO80 complex subunit B-like.	Zinc finger HIT domain-containing protein 2-like.	0.656
LOC107553541	LOC107555156	ENSSGRP00000086143	ENSSGRP00000074937	INO80 complex subunit B-like.	Zinc finger HIT domain-containing protein 2-like.	0.656
LOC107553541	LOC107570413	ENSSGRP00000086143	ENSSGRP00000068424	INO80 complex subunit B-like.	Box C/D snoRNA protein 1-like.	0.406
LOC107553541	znhit1	ENSSGRP00000086143	ENSSGRP00000082504	INO80 complex subunit B-like.	Zinc finger HIT domain-containing protein 1.	0.601
LOC107555156	ENSSGRP00000040387	ENSSGRP00000074937	ENSSGRP00000040387	Zinc finger HIT domain-containing protein 2-like.	Box C/D snoRNA protein 1-like isoform X1.	0.518
LOC107555156	LOC107553541	ENSSGRP00000074937	ENSSGRP00000086143	Zinc finger HIT domain-containing protein 2-like.	INO80 complex subunit B-like.	0.656
LOC107555156	LOC107570413	ENSSGRP00000074937	ENSSGRP00000068424	Zinc finger HIT domain-containing protein 2-like.	Box C/D snoRNA protein 1-like.	0.518
LOC107555156	znhit1	ENSSGRP00000074937	ENSSGRP00000082504	Zinc finger HIT domain-containing protein 2-like.	Zinc finger HIT domain-containing protein 1.	0.479
LOC107570413	LOC107548862	ENSSGRP00000068424	ENSSGRP00000003543	Box C/D snoRNA protein 1-like.	Zinc finger HIT domain-containing protein 2-like.	0.518
LOC107570413	LOC107553541	ENSSGRP00000068424	ENSSGRP00000086143	Box C/D snoRNA protein 1-like.	INO80 complex subunit B-like.	0.406
LOC107570413	LOC107555156	ENSSGRP00000068424	ENSSGRP00000074937	Box C/D snoRNA protein 1-like.	Zinc finger HIT domain-containing protein 2-like.	0.518