(13 nodes) Gtr1/RagA G protein conserved region network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107555516	Ras-related protein Rab-36-like. (261 aa)
	LOC107569739	Rab-like protein 3. (237 aa)
	ENSSGRP00000108950	annotation not available (93 aa)
	ENSSGRP00000005501	annotation not available (85 aa)
	ENSSGRP00000008646	Ras-related GTP binding Cb. (276 aa)
	ENSSGRP00000010314	zRAB1B, member RAS oncogene family a. (122 aa)
	LOC107552687	Ras-related protein Rab-8A. (84 aa)
	RRAGA	Ras-related GTP-binding protein A/B. (309 aa)
	ENSSGRP00000034239	Ras-related protein Rab-28-like. (221 aa)
	LOC107562552	Ras-related protein Rab-36-like. (261 aa)
	LOC107559580	Rab-like protein 2A. (222 aa)
	ENSSGRP00000071835	annotation not available (220 aa)
	ENSSGRP00000045955	Ras-related GTP-binding protein A-like. (258 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005501	ENSSGRP00000071835	ENSSGRP00000005501	ENSSGRP00000071835	annotation not available	annotation not available	0.448
ENSSGRP00000005501	LOC107555516	ENSSGRP00000005501	ENSSGRP00000045132	annotation not available	Ras-related protein Rab-36-like.	0.466
ENSSGRP00000005501	LOC107562552	ENSSGRP00000005501	ENSSGRP00000041080	annotation not available	Ras-related protein Rab-36-like.	0.466
ENSSGRP00000008646	ENSSGRP00000045955	ENSSGRP00000008646	ENSSGRP00000045955	Ras-related GTP binding Cb.	Ras-related GTP-binding protein A-like.	0.949
ENSSGRP00000008646	RRAGA	ENSSGRP00000008646	ENSSGRP00000022081	Ras-related GTP binding Cb.	Ras-related GTP-binding protein A/B.	0.949
ENSSGRP00000010314	LOC107552687	ENSSGRP00000010314	ENSSGRP00000011753	zRAB1B, member RAS oncogene family a.	Ras-related protein Rab-8A.	0.540
ENSSGRP00000010314	LOC107555516	ENSSGRP00000010314	ENSSGRP00000045132	zRAB1B, member RAS oncogene family a.	Ras-related protein Rab-36-like.	0.427
ENSSGRP00000010314	LOC107559580	ENSSGRP00000010314	ENSSGRP00000042084	zRAB1B, member RAS oncogene family a.	Rab-like protein 2A.	0.412
ENSSGRP00000010314	LOC107562552	ENSSGRP00000010314	ENSSGRP00000041080	zRAB1B, member RAS oncogene family a.	Ras-related protein Rab-36-like.	0.428
ENSSGRP00000045955	ENSSGRP00000008646	ENSSGRP00000045955	ENSSGRP00000008646	Ras-related GTP-binding protein A-like.	Ras-related GTP binding Cb.	0.949
ENSSGRP00000045955	RRAGA	ENSSGRP00000045955	ENSSGRP00000022081	Ras-related GTP-binding protein A-like.	Ras-related GTP-binding protein A/B.	0.901
ENSSGRP00000071835	ENSSGRP00000005501	ENSSGRP00000071835	ENSSGRP00000005501	annotation not available	annotation not available	0.448
ENSSGRP00000071835	LOC107552687	ENSSGRP00000071835	ENSSGRP00000011753	annotation not available	Ras-related protein Rab-8A.	0.500
ENSSGRP00000071835	LOC107555516	ENSSGRP00000071835	ENSSGRP00000045132	annotation not available	Ras-related protein Rab-36-like.	0.402
ENSSGRP00000071835	LOC107562552	ENSSGRP00000071835	ENSSGRP00000041080	annotation not available	Ras-related protein Rab-36-like.	0.402
LOC107552687	ENSSGRP00000010314	ENSSGRP00000011753	ENSSGRP00000010314	Ras-related protein Rab-8A.	zRAB1B, member RAS oncogene family a.	0.540
LOC107552687	ENSSGRP00000071835	ENSSGRP00000011753	ENSSGRP00000071835	Ras-related protein Rab-8A.	annotation not available	0.500
LOC107555516	ENSSGRP00000005501	ENSSGRP00000045132	ENSSGRP00000005501	Ras-related protein Rab-36-like.	annotation not available	0.466
LOC107555516	ENSSGRP00000010314	ENSSGRP00000045132	ENSSGRP00000010314	Ras-related protein Rab-36-like.	zRAB1B, member RAS oncogene family a.	0.427
LOC107555516	ENSSGRP00000071835	ENSSGRP00000045132	ENSSGRP00000071835	Ras-related protein Rab-36-like.	annotation not available	0.402