(12 nodes) Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs) network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107566269	E3 ubiquitin-protein ligase AMFR-like. (624 aa)
	ENSSGRP00000096054	LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 2-like. (750 aa)
	LOC107555700	E3 ubiquitin-protein ligase AMFR-like. (626 aa)
	LOC107550181	Toll-interacting protein. (279 aa)
	ENSSGRP00000060364	CUE domain-containing protein 1-like. (382 aa)
	ENSSGRP00000059767	Toll-interacting protein-like. (278 aa)
	LOC107578341	CUE domain-containing protein 1-like isoform X1. (410 aa)
	LOC107583362	CUE domain-containing protein 1-like. (386 aa)
	Aup1	Ancient ubiquitous protein 1. (418 aa)
	LOC107587359	CUE domain-containing protein 1-like. (389 aa)
	ENSSGRP00000022783	Activating signal cointegrator 1 complex subunit 2-like. (675 aa)
	LOC107585843	TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1. (537 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Aup1	LOC107555700	ENSSGRP00000039652	ENSSGRP00000075275	Ancient ubiquitous protein 1.	E3 ubiquitin-protein ligase AMFR-like.	0.689
Aup1	LOC107566269	ENSSGRP00000039652	ENSSGRP00000028261	Ancient ubiquitous protein 1.	E3 ubiquitin-protein ligase AMFR-like.	0.689
ENSSGRP00000059767	LOC107550181	ENSSGRP00000059767	ENSSGRP00000063175	Toll-interacting protein-like.	Toll-interacting protein.	0.900
LOC107550181	ENSSGRP00000059767	ENSSGRP00000063175	ENSSGRP00000059767	Toll-interacting protein.	Toll-interacting protein-like.	0.900
LOC107555700	Aup1	ENSSGRP00000075275	ENSSGRP00000039652	E3 ubiquitin-protein ligase AMFR-like.	Ancient ubiquitous protein 1.	0.689
LOC107555700	LOC107566269	ENSSGRP00000075275	ENSSGRP00000028261	E3 ubiquitin-protein ligase AMFR-like.	E3 ubiquitin-protein ligase AMFR-like.	0.900
LOC107566269	Aup1	ENSSGRP00000028261	ENSSGRP00000039652	E3 ubiquitin-protein ligase AMFR-like.	Ancient ubiquitous protein 1.	0.689
LOC107566269	LOC107555700	ENSSGRP00000028261	ENSSGRP00000075275	E3 ubiquitin-protein ligase AMFR-like.	E3 ubiquitin-protein ligase AMFR-like.	0.900