STRINGSTRING
Tint_0597 Tint_0597 Tint_1002 Tint_1002 dadA dadA Tint_1849 Tint_1849 Tint_2455 Tint_2455 Tint_2884 Tint_2884
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0597Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (367 aa)
Tint_1002TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: bbr:BB4213 putative hemolysin; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (371 aa)
dadAFAD dependent oxidoreductase; Oxidative deamination of D-amino acids. (430 aa)
Tint_1849PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A2293 aromatic amino acid aminotransferase. (401 aa)
Tint_2455PFAM: FAD dependent oxidoreductase; KEGG: bja:bll4301 putative oxidoreductase protein. (347 aa)
Tint_2884PFAM: aminotransferase class IV; KEGG: bxe:Bxe_A4217 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. (291 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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