STRINGSTRING
Tint_1152 Tint_1152 fliP fliP fliQ fliQ Tint_1155 Tint_1155 flhB flhB flhA flhA Tint_1161 Tint_1161 Tint_1187 Tint_1187 Tint_1188 Tint_1188 Tint_1190 Tint_1190 flgI flgI flgH flgH Tint_1193 Tint_1193 Tint_1194 Tint_1194 Tint_1195 Tint_1195 Tint_1196 Tint_1196 Tint_1197 Tint_1197 Tint_1198 Tint_1198 Tint_1200 Tint_1200 Tint_1205 Tint_1205 Tint_1207 Tint_1207 Tint_1208 Tint_1208 Tint_1210 Tint_1210 fliE fliE Tint_1215 Tint_1215 Tint_1216 Tint_1216 Tint_1217 Tint_1217 Tint_1218 Tint_1218 Tint_1220 Tint_1220 Tint_1221 Tint_1221 Tint_1222 Tint_1222 Tint_1223 Tint_1223
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1152KEGG: hha:Hhal_0485 flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; PFAM: flagellar biosynthesis protein FliO. (128 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (255 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (91 aa)
Tint_1155Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (266 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (373 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (684 aa)
Tint_1161PFAM: MotA/TolQ/ExbB proton channel; KEGG: cvi:CV_1021 flagellar motor protein. (247 aa)
Tint_1187KEGG: tgr:Tgr7_1227 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein. (417 aa)
Tint_1188KEGG: tbd:Tbd_1628 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (667 aa)
Tint_1190TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: aeh:Mlg_0901 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2. (362 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (409 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (237 aa)
Tint_1193KEGG: mei:Msip34_0774 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein. (261 aa)
Tint_1194KEGG: dar:Daro_0753 hypothetical protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein. (245 aa)
Tint_1195Fagellar hook-basal body protein; KEGG: tbd:Tbd_1634 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein. (414 aa)
Tint_1196Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (232 aa)
Tint_1197KEGG: nmu:Nmul_A1322 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (138 aa)
Tint_1198Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (135 aa)
Tint_1200Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (242 aa)
Tint_1205Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (491 aa)
Tint_1207Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (653 aa)
Tint_1208TIGRFAM: flagellar protein FliS; KEGG: azo:azo2707 flagellar protein FliS. (137 aa)
Tint_1210PFAM: OmpA/MotB domain protein; KEGG: har:HEAR1316 flagellar motor protein MotD. (298 aa)
fliEKEGG: mmb:Mmol_0926 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. (117 aa)
Tint_1215Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (568 aa)
Tint_1216KEGG: tgr:Tgr7_1968 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG. (338 aa)
Tint_1217PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: rme:Rmet_5263 flagellar assembly protein H. (244 aa)
Tint_1218TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: aeh:Mlg_0712 flagellar protein export ATPase FliI; SMART: AAA ATPase. (448 aa)
Tint_1220PFAM: flagellar hook-length control protein; KEGG: bmn:BMA10247_3405 flagellar hook-length control protein. (443 aa)
Tint_1221Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (189 aa)
Tint_1222KEGG: lhk:LHK_02354 FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein. (336 aa)
Tint_1223Flagellar motor switch protein FliN; KEGG: dar:Daro_0765 type III secretion system outer membrane O protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein. (144 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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