STRINGSTRING
Tint_0277 Tint_0277 Tint_0278 Tint_0278 Tint_0455 Tint_0455 Tint_0533 Tint_0533 Tint_0534 Tint_0534 Tint_0535 Tint_0535 Tint_0653 Tint_0653 Tint_0700 Tint_0700 Tint_0921 Tint_0921 Tint_0970 Tint_0970 Tint_1068 Tint_1068 Tint_1069 Tint_1069 Tint_1070 Tint_1070 Tint_1071 Tint_1071 Tint_1072 Tint_1072 Tint_1073 Tint_1073 Tint_1074 Tint_1074 Tint_1075 Tint_1075 Tint_1076 Tint_1076 Tint_1077 Tint_1077 Tint_1465 Tint_1465 Tint_1466 Tint_1466 Tint_1875 Tint_1875 Tint_2348 Tint_2348 ctaB ctaB Tint_2587 Tint_2587 Tint_2588 Tint_2588 Tint_2589 Tint_2589 Tint_2590 Tint_2590 Tint_2705 Tint_2705 tsdA tsdA tsdB tsdB Tint_3135 Tint_3135
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0277Gluconate 2-dehydrogenase (acceptor); KEGG: pfl:PFL_0055 cytochrome c family protein; PFAM: cytochrome c class I. (429 aa)
Tint_0278PFAM: cytochrome c class I; KEGG: dac:Daci_2499 gluconate 2-dehydrogenase (acceptor). (331 aa)
Tint_0455PFAM: cytochrome c class I; KEGG: rpi:Rpic_3367 cytochrome c class I. (210 aa)
Tint_0533KEGG: sml:Smlt4328 hypothetical protein. (204 aa)
Tint_0534PFAM: cytochrome c class I; KEGG: mpt:Mpe_A1095 cytochrome c553-like protein. (121 aa)
Tint_0535PFAM: cytochrome c class I; KEGG: pnu:Pnuc_0908 cytochrome c, class I. (121 aa)
Tint_0653PFAM: cytochrome c class I; KEGG: bpd:BURPS668_3714 cytochrome c family protein. (238 aa)
Tint_0700KEGG: hna:Hneap_2228 hypothetical protein. (208 aa)
Tint_0921Gluconate 2-dehydrogenase (acceptor); KEGG: pau:PA14_35270 putative cytochrome c precursor; PFAM: cytochrome c class I. (425 aa)
Tint_0970KEGG: afr:AFE_3230 hypothetical protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase. (898 aa)
Tint_1068Heavy metal translocating P-type ATPase; KEGG: rso:RSc1274 cation-transporting ATPase lipoprotein transmembrane; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase. (837 aa)
Tint_1069KEGG: app:CAP2UW1_2537 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type. (72 aa)
Tint_1070KEGG: rpf:Rpic12D_1197 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (480 aa)
Tint_1071KEGG: reu:Reut_A2040 cytochrome c oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO. (213 aa)
Tint_1072PFAM: Cbb3-type cytochrome oxidase component; KEGG: cja:CJA_2632 cytochrome c oxidase subunit-related protein. (64 aa)
Tint_1073Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (314 aa)
Tint_1074TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: reu:Reut_A2037 4Fe-4S ferredoxin, iron-sulfur binding. (472 aa)
Tint_1075PFAM: FixH family protein; KEGG: app:CAP2UW1_2531 hypothetical protein. (159 aa)
Tint_1076Transcriptional regulator, Crp/Fnr family; KEGG: reh:PHG276 transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding. (245 aa)
Tint_1077KEGG: rpf:Rpic12D_1205 hypothetical protein. (246 aa)
Tint_1465KEGG: mpt:Mpe_A1095 cytochrome c553-like protein. (115 aa)
Tint_1466PFAM: cytochrome c class I; KEGG: rso:RSc1000 putative periplasmic cytochrome type-c oxidoreductase signal peptide protein. (121 aa)
Tint_1875PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: bpd:BURPS668_2760 hypothetical protein. (290 aa)
Tint_2348PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: afr:AFE_0950 oxidoreductase, GMC family. (417 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (302 aa)
Tint_2587PFAM: cytochrome oxidase assembly; KEGG: bmj:BMULJ_02791 cytochrome c oxidase subunit XV assembly protein. (387 aa)
Tint_2588KEGG: bpt:Bpet0175 hypothetical protein. (212 aa)
Tint_2589KEGG: bph:Bphy_0283 hypothetical protein. (253 aa)
Tint_2590KEGG: mms:mma_3148 hypothetical protein. (67 aa)
Tint_2705PFAM: Di-haem cytochrome c peroxidase; KEGG: bte:BTH_II1637 di-haem cytochrome c peroxidase family protein. (517 aa)
tsdACytochrome c class I; Catalyzes the oxidation of 2 molecules of thiosulfate to tetrathionate, using TsdB as an electron acceptor. (314 aa)
tsdBCytochrome c class I; Acts as an electron acceptor for the thiosulfate dehydrogenase TsdA. (217 aa)
Tint_3135Gluconate 2-dehydrogenase (acceptor); KEGG: pfl:PFL_5004 cytochrome c family protein; PFAM: cytochrome c class I. (384 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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