STRINGSTRING
Tint_0828 Tint_0828 Tint_1947 Tint_1947 Tint_2294 Tint_2294 Tint_2295 Tint_2295 Tint_2296 Tint_2296 Tint_2297 Tint_2297 Tint_2298 Tint_2298 Tint_2299 Tint_2299 Tint_2300 Tint_2300 Tint_3151 Tint_3151 Tint_3152 Tint_3152 Tint_3153 Tint_3153 Tint_3154 Tint_3154 Tint_3157 Tint_3157 Tint_3158 Tint_3158
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0828PFAM: glutaredoxin; KEGG: ctt:CtCNB1_2875 hypothetical protein. (206 aa)
Tint_1947PFAM: Domain of unknown function DUF1791; KEGG: rso:RSc3257 putative signal peptide protein. (155 aa)
Tint_2294PFAM: 5'-Nucleotidase domain protein; KEGG: mms:mma_0453 sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family. (579 aa)
Tint_2295KEGG: ade:Adeh_2280 hypothetical protein. (216 aa)
Tint_2296KEGG: pol:Bpro_2627 hypothetical protein. (281 aa)
Tint_2297PFAM: Sulphur oxidation protein SoxZ; KEGG: lch:Lcho_3781 sulphur oxidation protein SoxZ. (103 aa)
Tint_2298KEGG: pol:Bpro_2629 twin-arginine translocation pathway signal. (157 aa)
Tint_2299PFAM: cytochrome c class I; KEGG: ctt:CtCNB1_2872 cytochrome c, class I. (374 aa)
Tint_2300PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: dar:Daro_3134 oxidoreductase molybdopterin binding subunit. (459 aa)
Tint_3151KEGG: ank:AnaeK_1594 hypothetical protein. (286 aa)
Tint_3152KEGG: rpb:RPB_4373 hypothetical protein. (238 aa)
Tint_3153KEGG: dar:Daro_4039 beta-lactamase-like. (344 aa)
Tint_3154PFAM: Domain of unknown function DUF1791; KEGG: reh:H16_A3567 hypothetical protein. (149 aa)
Tint_3157KEGG: pol:Bpro_2629 twin-arginine translocation pathway signal. (157 aa)
Tint_3158PFAM: Sulphur oxidation protein SoxZ; KEGG: lch:Lcho_3781 sulphur oxidation protein SoxZ. (103 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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