STRINGSTRING
Tint_0044 Tint_0044 Tint_0045 Tint_0045 Tint_0046 Tint_0046 Tint_0047 Tint_0047 Tint_0048 Tint_0048 Tint_0049 Tint_0049 Tint_0050 Tint_0050 Tint_0051 Tint_0051 Tint_0052 Tint_0052 Tint_0053 Tint_0053 rlmJ rlmJ Tint_1042 Tint_1042 Tint_1043 Tint_1043 Tint_1044 Tint_1044 Tint_1045 Tint_1045 Tint_1046 Tint_1046 Tint_1804 Tint_1804 Tint_1805 Tint_1805 Tint_2396 Tint_2396 Tint_2397 Tint_2397 Tint_2398 Tint_2398
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0044PFAM: cytochrome B561; KEGG: pna:Pnap_3658 cytochrome b561. (175 aa)
Tint_0045KEGG: cja:CJA_0399 hypothetical protein. (95 aa)
Tint_0046PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: mei:Msip34_2161 membrane protein involved in aromatic hydrocarbon degradation. (419 aa)
Tint_0047Hypothetical protein; KEGG: saq:Sare_2770 transport-associated. (110 aa)
Tint_0048PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bpy:Bphyt_5602 protein of unknown function DUF395 YeeE/YedE. (158 aa)
Tint_0049PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bbr:BB0225 hypothetical protein. (147 aa)
Tint_0050Hypothetical protein. (79 aa)
Tint_0051KEGG: tbd:Tbd_2771 two component Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase. (456 aa)
Tint_0052KEGG: tgr:Tgr7_2495 hypothetical protein. (167 aa)
Tint_0053Integral membrane sensor signal transduction histidine kinase; Manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: nmu:Nmul_A1159 periplasmic sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (487 aa)
rlmJProtein of unknown function DUF519; Specifically methylates the adenine in position 2030 of 23S rRNA. (281 aa)
Tint_1042PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bpy:Bphyt_5602 protein of unknown function DUF395 YeeE/YedE. (155 aa)
Tint_1043PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: maq:Maqu_1493 protein of unknown function DUF395, YeeE/YedE. (149 aa)
Tint_1044KEGG: psa:PST_2528 ArsR family regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR. (114 aa)
Tint_1045KEGG: abo:ABO_1941 metallo-beta-lactamase family protein. (288 aa)
Tint_1046KEGG: aav:Aave_3421 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold. (800 aa)
Tint_1804PFAM: SirA family protein; KEGG: mpt:Mpe_A1134 hypothetical protein; Belongs to the sulfur carrier protein TusA family. (74 aa)
Tint_1805PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: aba:Acid345_3624 rubrerythrin. (332 aa)
Tint_2396PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rfr:Rfer_1811 protein of unknown function DUF395, YeeE/YedE. (158 aa)
Tint_2397PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rfr:Rfer_1810 protein of unknown function DUF395, YeeE/YedE. (141 aa)
Tint_2398Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily. (210 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.