STRINGSTRING
Tint_1809 Tint_1809 Tint_1810 Tint_1810 Tint_1811 Tint_1811 Tint_1812 Tint_1812 Tint_1813 Tint_1813
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1809KEGG: afr:AFE_2865 hypothetical protein. (111 aa)
Tint_1810PFAM: ABC-2 type transporter; KEGG: afr:AFE_2864 ABC transporter, permease protein, putative. (369 aa)
Tint_1811PFAM: ABC-2 type transporter; KEGG: afr:AFE_2863 ABC transporter, permease protein, putative. (371 aa)
Tint_1812KEGG: afr:AFE_2862 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (600 aa)
Tint_1813PFAM: secretion protein HlyD family protein; KEGG: afr:AFE_2861 secretion protein, HlyD family. (345 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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