STRINGSTRING
Tint_0171 Tint_0171 Tint_0172 Tint_0172 Tint_0173 Tint_0173 Tint_0174 Tint_0174 Tint_0175 Tint_0175
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0171PFAM: Extracellular ligand-binding receptor; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: acr:Acry_1052 extracellular ligand-binding receptor. (420 aa)
Tint_0172PFAM: inner-membrane translocator; KEGG: acr:Acry_1051 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (289 aa)
Tint_0173PFAM: inner-membrane translocator; KEGG: acr:Acry_3458 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
Tint_0174KEGG: acr:Acry_1049 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (249 aa)
Tint_0175KEGG: acr:Acry_1048 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (236 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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