STRINGSTRING
Tint_0504 Tint_0504 Tint_1086 Tint_1086 Tint_1400 Tint_1400 Tint_1401 Tint_1401 Tint_1402 Tint_1402 Tint_1403 Tint_1403 Tint_1404 Tint_1404 Tint_1405 Tint_1405 Tint_1558 Tint_1558 Tint_1559 Tint_1559 Tint_1562 Tint_1562 Tint_1577 Tint_1577 Tint_1578 Tint_1578 Tint_2486 Tint_2486 Tint_2487 Tint_2487 Tint_2552 Tint_2552 Tint_2553 Tint_2553 Tint_2982 Tint_2982 Tint_2983 Tint_2983 Tint_3012 Tint_3012 Tint_3013 Tint_3013 Tint_3015 Tint_3015 Tint_3016 Tint_3016 Tint_3017 Tint_3017 Tint_3183 Tint_3183
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0504KEGG: ajs:Ajs_3098 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (273 aa)
Tint_1086KEGG: ajs:Ajs_3098 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (273 aa)
Tint_1400PFAM: Integrase catalytic region; KEGG: vei:Veis_4709 integrase catalytic subunit. (298 aa)
Tint_1401PFAM: transposase IS3/IS911 family protein; KEGG: vei:Veis_4708 transposase IS3/IS911 family protein. (80 aa)
Tint_1402PFAM: transposase Tn3 family protein; KEGG: bpt:Bpet3722 ISSod9, transposase. (739 aa)
Tint_1403PFAM: IstB domain protein ATP-binding protein; KEGG: vap:Vapar_2114 IstB domain protein ATP-binding protein. (272 aa)
Tint_1404PFAM: Integrase catalytic region; KEGG: vap:Vapar_2113 integrase catalytic region. (506 aa)
Tint_1405KEGG: pol:Bpro_2488 cointegrate resolution protein T. (366 aa)
Tint_1558KEGG: nfa:nfa36920 hypothetical protein. (56 aa)
Tint_1559KEGG: pol:Bpro_1939 IstB-like ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase. (245 aa)
Tint_1562KEGG: ajs:Ajs_3098 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (273 aa)
Tint_1577KEGG: ajs:Ajs_3593 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (245 aa)
Tint_1578KEGG: ajs:Ajs_3594 integrase catalytic subunit; manually curated; PFAM: Integrase catalytic region. (514 aa)
Tint_2486PFAM: Integrase catalytic region; KEGG: vap:Vapar_0682 integrase catalytic region. (510 aa)
Tint_2487Manually curated; PFAM: IstB domain protein ATP-binding protein; KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; SMART: AAA ATPase. (254 aa)
Tint_2552PFAM: Integrase catalytic region; KEGG: vap:Vapar_0682 integrase catalytic region. (510 aa)
Tint_2553KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (254 aa)
Tint_2982PFAM: Integrase catalytic region; KEGG: vap:Vapar_0682 integrase catalytic region. (510 aa)
Tint_2983KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (254 aa)
Tint_3012KEGG: app:CAP2UW1_4528 hypothetical protein. (71 aa)
Tint_3013KEGG: tmz:Tmz1t_3158 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (250 aa)
Tint_3015KEGG: tmz:Tmz1t_4040 hypothetical protein. (394 aa)
Tint_3016KEGG: vap:Vapar_2114 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (272 aa)
Tint_3017PFAM: Integrase catalytic region; KEGG: vap:Vapar_2113 integrase catalytic region. (493 aa)
Tint_3183KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (254 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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