STRINGSTRING
Tint_1562 Tint_1562 Tint_2982 Tint_2982 Tint_2983 Tint_2983 Tint_3016 Tint_3016 Tint_3017 Tint_3017
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1562KEGG: ajs:Ajs_3098 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (273 aa)
Tint_2982PFAM: Integrase catalytic region; KEGG: vap:Vapar_0682 integrase catalytic region. (510 aa)
Tint_2983KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (254 aa)
Tint_3016KEGG: vap:Vapar_2114 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase. (272 aa)
Tint_3017PFAM: Integrase catalytic region; KEGG: vap:Vapar_2113 integrase catalytic region. (493 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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