STRINGSTRING
Tint_1183 Tint_1183 Tint_1188 Tint_1188 Tint_1208 Tint_1208 Tint_1200 Tint_1200 Tint_1190 Tint_1190 Tint_1220 Tint_1220 fliQ fliQ Tint_1155 Tint_1155 flhA flhA Tint_1218 Tint_1218 Tint_1181 Tint_1181
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1183Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. Belongs to the FliW family. (147 aa)
Tint_1188KEGG: tbd:Tbd_1628 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (667 aa)
Tint_1208TIGRFAM: flagellar protein FliS; KEGG: azo:azo2707 flagellar protein FliS. (137 aa)
Tint_1200Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (242 aa)
Tint_1190TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: aeh:Mlg_0901 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2. (362 aa)
Tint_1220PFAM: flagellar hook-length control protein; KEGG: bmn:BMA10247_3405 flagellar hook-length control protein. (443 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (91 aa)
Tint_1155Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (266 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (684 aa)
Tint_1218TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: aeh:Mlg_0712 flagellar protein export ATPase FliI; SMART: AAA ATPase. (448 aa)
Tint_1181PFAM: FlgN family protein; KEGG: spe:Spro_2973 FlgN family protein. (142 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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