STRINGSTRING
Tint_0012 Tint_0012 Tint_0013 Tint_0013 Tint_0239 Tint_0239 Tint_0240 Tint_0240 Tint_1070 Tint_1070 Tint_1071 Tint_1071 Tint_1110 Tint_1110 Tint_1111 Tint_1111 Tint_2076 Tint_2076 Tint_2077 Tint_2077 Tint_2193 Tint_2193 Tint_2593 Tint_2593
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_0012KEGG: bav:BAV0992 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II. (377 aa)
Tint_0013PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bav:BAV0991 cytochrome d ubiquinol oxidase subunit I. (545 aa)
Tint_0239KEGG: ava:Ava_B0174 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II. (341 aa)
Tint_0240PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sfu:Sfum_3051 cytochrome bd ubiquinol oxidase, subunit I. (494 aa)
Tint_1070KEGG: rpf:Rpic12D_1197 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (480 aa)
Tint_1071KEGG: reu:Reut_A2040 cytochrome c oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO. (213 aa)
Tint_1110KEGG: tgr:Tgr7_0683 cytochrome c class I. (493 aa)
Tint_1111KEGG: tgr:Tgr7_0684 hypothetical protein. (414 aa)
Tint_2076KEGG: tgr:Tgr7_0683 cytochrome c class I. (477 aa)
Tint_2077KEGG: hna:Hneap_1847 hypothetical protein. (411 aa)
Tint_2193Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (467 aa)
Tint_2593Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (543 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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