STRINGSTRING
Tint_1468 Tint_1468 Tint_2297 Tint_2297 Tint_2510 Tint_2510 Tint_2300 Tint_2300 Tint_1096 Tint_1096 glgB glgB Tint_1445 Tint_1445 Tint_1447 Tint_1447
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1468PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mrd:Mrad2831_5267 oxidoreductase molybdopterin binding. (413 aa)
Tint_2297PFAM: Sulphur oxidation protein SoxZ; KEGG: lch:Lcho_3781 sulphur oxidation protein SoxZ. (103 aa)
Tint_2510PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: dge:Dgeo_2838 twin-arginine translocation pathway signal. (425 aa)
Tint_2300PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: dar:Daro_3134 oxidoreductase molybdopterin binding subunit. (459 aa)
Tint_1096TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: vap:Vapar_0414 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (731 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (731 aa)
Tint_1445Periplasmic glucan biosynthesis protein MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (537 aa)
Tint_1447Periplasmic glucan biosynthesis protein MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (509 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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