STRINGSTRING
Tint_1202 Tint_1202 Tint_1171 Tint_1171 Tint_1203 Tint_1203 Tint_1176 Tint_1176 Tint_2541 Tint_2541 Tint_1233 Tint_1233 Tint_2543 Tint_2543 Tint_1230 Tint_1230
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1202Putative CheA signal transduction histidine kinase; KEGG: bpa:BPP1221 DNA polymerase III subunits gamma and tau. (355 aa)
Tint_1171KEGG: tbd:Tbd_1598 CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver. (321 aa)
Tint_1203PFAM: CheW domain protein; KEGG: bpy:Bphyt_3976 CheW protein. (169 aa)
Tint_1176CheA signal transduction histidine kinase; KEGG: amc:MADE_02867 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein. (674 aa)
Tint_2541PFAM: CheW domain protein; KEGG: aav:Aave_0903 CheW protein. (174 aa)
Tint_1233CheA signal transduction histidine kinase; KEGG: azo:azo0408 putative chemotaxis protein histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein. (746 aa)
Tint_2543CheA signal transduction histidine kinase; KEGG: mpt:Mpe_A3186 twitching motility protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein. (1989 aa)
Tint_1230CheW protein; KEGG: tmz:Tmz1t_1319 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein. (179 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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