STRINGSTRING
Tint_1201 Tint_1201 Tint_0042 Tint_0042 Tint_0251 Tint_0251 Tint_0468 Tint_0468 Tint_0546 Tint_0546 Tint_0547 Tint_0547 Tint_0601 Tint_0601 Tint_0612 Tint_0612 Tint_0637 Tint_0637 Tint_0808 Tint_0808 Tint_0890 Tint_0890 Tint_0914 Tint_0914 Tint_0915 Tint_0915 Tint_1166 Tint_1166 Tint_1169 Tint_1169 Tint_1228 Tint_1228 Tint_3172 Tint_3172 Tint_2912 Tint_2912 Tint_2830 Tint_2830 Tint_2797 Tint_2797 Tint_2563 Tint_2563 Tint_2517 Tint_2517 Tint_2172 Tint_2172 Tint_2170 Tint_2170 Tint_1830 Tint_1830 Tint_1256 Tint_1256
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1201TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: lch:Lcho_3903 diguanylate cyclase; SMART: GGDEF domain containing protein. (325 aa)
Tint_0042TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; KEGG: pmy:Pmen_0469 diguanylate cyclase; SMART: GGDEF domain containing protein. (591 aa)
Tint_0251TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: rru:Rru_A1908 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein. (530 aa)
Tint_0468Diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: rru:Rru_A1908 response regulator receiver modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-4 domain protein; PAS fold domain protein. (752 aa)
Tint_0546TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: afr:AFE_1712 diguanylate cyclase, putative; SMART: GGDEF domain containing protein; EAL domain protein. (801 aa)
Tint_0547TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: afe:Lferr_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein. (799 aa)
Tint_0601Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; KEGG: hna:Hneap_1694 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein. (1119 aa)
Tint_0612KEGG: mmb:Mmol_1614 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein. (415 aa)
Tint_0637Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: rso:RSc0510 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein. (934 aa)
Tint_0808TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: aav:Aave_2043 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein. (451 aa)
Tint_0890TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: pmx:PERMA_0188 signal transduction response regulator; SMART: GGDEF domain containing protein; EAL domain protein. (780 aa)
Tint_0914Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: hna:Hneap_0485 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: GGDEF domain containing protein; GAF domain protein. (720 aa)
Tint_0915TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: dac:Daci_5901 diguanylate cyclase; SMART: GGDEF domain containing protein. (361 aa)
Tint_1166TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: azo:azo2691 GGDEF family protein; SMART: GGDEF domain containing protein. (546 aa)
Tint_1169Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: hna:Hneap_1694 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein; EAL domain protein. (1494 aa)
Tint_1228Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: cja:CJA_1985 sensory box/GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein. (1082 aa)
Tint_3172TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cvi:CV_0387 hypothetical protein; SMART: GGDEF domain containing protein. (523 aa)
Tint_2912DNA-directed DNA polymerase; KEGG: xcc:XCC2964 polymerase V subunit; PFAM: UMUC domain protein DNA-repair protein. (431 aa)
Tint_2830TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: hna:Hneap_1260 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein. (420 aa)
Tint_2797TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vvy:VVA0406 GGDEF family protein; SMART: GGDEF domain containing protein. (400 aa)
Tint_2563TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: afe:Lferr_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein. (931 aa)
Tint_2517Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: rfr:Rfer_2893 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; EAL domain protein. (840 aa)
Tint_2172TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cti:RALTA_A0962 putative diguanylate cyclase with PAS sensor domain; SMART: GGDEF domain containing protein. (487 aa)
Tint_2170TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Metal-dependent hydrolase HDOD; response regulator receiver; KEGG: azo:azo1444 response regulator; SMART: GGDEF domain containing protein; response regulator receiver. (630 aa)
Tint_1830TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; KEGG: hna:Hneap_1141 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein. (440 aa)
Tint_1256TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: har:HEAR1023 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein. (607 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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