STRINGSTRING
Tint_1187 Tint_1187 Tint_1205 Tint_1205 Tint_0292 Tint_0292 apt apt Tint_0407 Tint_0407 Tint_0436 Tint_0436 pncB pncB pgi pgi Tint_1095 Tint_1095 Tint_2840 Tint_2840 Tint_2839 Tint_2839 Tint_2240 Tint_2240 Tint_2184 Tint_2184 Tint_2055 Tint_2055 serS serS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tint_1187KEGG: tgr:Tgr7_1227 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein. (417 aa)
Tint_1205Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (491 aa)
Tint_0292Porphobilinogen synthase; KEGG: cti:RALTA_A2913 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (337 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (181 aa)
Tint_0407PFAM: protein of unknown function UPF0005; KEGG: bbr:BB3739 putative integral membrane protein; Belongs to the BI1 family. (233 aa)
Tint_0436KEGG: afr:AFE_1764 hypothetical protein; Belongs to the BI1 family. (137 aa)
pncBNicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. (405 aa)
pgiPFAM: phosphoglucose isomerase (PGI); KEGG: bpt:Bpet4022 hypothetical protein; Belongs to the GPI family. (502 aa)
Tint_1095PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: similar to phosphoglucomutase 1. (543 aa)
Tint_2840PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0683 porin. (414 aa)
Tint_2839PFAM: porin Gram-negative type; KEGG: mms:mma_0290 outer membrane porin. (375 aa)
Tint_2240TIGRFAM: hydroxyisourate hydrolase; KEGG: bvi:Bcep1808_1883 transthyretin; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (120 aa)
Tint_2184PFAM: protein of unknown function UPF0005; KEGG: aeh:Mlg_1630 hypothetical protein; Belongs to the BI1 family. (233 aa)
Tint_2055PFAM: outer membrane porin; KEGG: afr:AFE_1497 hypothetical protein. (451 aa)
serSseryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (430 aa)
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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